Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2795 |
Symbol | |
ID | 8020466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2963895 |
End bp | 2965853 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831582 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002982738 |
Protein GI | 241664378 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.950985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAATC TTCAACTGCT GCTGGTCGAA GACAATCCGC TCGACGCAGA ACTTACGCGC GCACGGCTGG AAACCGCCAA CCTGCAGGCT GACATCACGC TGGTCGACAA CGAAACCGAC TTCATCGCCC AACTGAGCGC GCGGACCTTC GACGCCATCC TGGCCGACTA CATGCTGCCG CAGTTCACGG GGGCAGAGGC GCTCGACATT GCGCGCCGCA TGGCACCGCA AACGCCGTTC ATCTTCGTAT CCGGTGCGCT GGGCGAGGAG CACGCGGTGG ACATGCTCAA GCGTGGCGCC ACCGATTACG TCATCAAGCA GCGACTGCAA CGCCTGCCCG TGGTGCTGCT GCGGGCGCTG GCCGAGGCGG CCGAACGCCG CCAGCGCATC GCCGCAGAAG CTGCCCTGCG CGAAGCGGAA ACGCACTTCC GATTGCTGAT CAATGCGCTC AAGGAGCACG CCGTGCTCTC GCTCGACCCG CAGGGCATCG TGCGTACGTG GAACGCCGCG TCGCGCAGCA TTCTCGGGTA TGCGCGTGAA GACATCCTAG GCAAGTCGGC CGAGATTCTC TACCCGCAAG CCGCGCGCGA GGCCGGTGAA TTCCAGCGCA AGCTCGAACG CGTGCGCCGC GAAGGCAGCC TCACCGACGA CCGCTGGATG CTGCGCAAGG ACGGCACGCC GTTCTACGCA TCCAGCGTGG TCACCGCCAT CCACAACGAG ACGGGGCAAC TGGTCGGCTT CTCGAAGATC ATCCGCGACT CGACGGAAGA GCGCATCGCC GCAGACGCCC TGCGCCGTGC CAAGGAAGAA GCCGAGACCG CCAACCACGC CAAGGACCAC TTCCTGGCCG TGCTCTCGCA TGAGCTGCGC ACGCCGCTTA CGCCCATCCT GACCGCCGTG CATCTGCTGG AGCTGCGCCA GGATTTGCCG GCGTATGCGG TCGCGCAGCT CGAAGTCGTG CGCCGCAATG CCGAGCTGGA AGCGCGCCTG ATCGACGACC TGCTCGACAT CACCGGCATT GCGCGCGGCA AGCTGGCCGT GAGCTTTGCG CTGGTCGACC TGTATCCGCT TTTGGAGAGC ACGCTGGAGA TATCGCGCAA CGACATGCAG GCCAAGCGGC TCTCGCTCAA GACGCGCTTC GAGGCGGGCC GCAGCCGGCT GTACGCGGAC GGCGCGCGCA TCCAACAAGT GATCTGGAAC CTGGTGCGCA ACGCGGTCAA GTTCACGCCC GAAGGCGGCG CCATCGAGGT GCGCGTCTGG AACCCGTCGG CCTCCACCGT GGCCGTGTCC GTGAAGGACA ACGGCATCGG CATTGAGCCC GACGCGCTAC CGCGCATCTT CTCGGCGTTC GAGCAGGCCG ATGCATCGAT CACACAGCGC TTTGGCGGGC TTGGCCTGGG CCTGGCGATT GCCTATGCGC TGGTGCAGAA GCATGAGGGT TCATTGATCG CTGAGAGCGC CGGCCGCCAC GAGGGCGCCA CGTTCACACT CACGCTGCCG CTGGCCACCG AGATGGTGCA GCCCGAGACG CCGCCGTCGC CGCCCTCGCC ACGCGCCCAA CCGACGCGCG GCCTGCACGT GCTGTTGGTG GAAGACAACG CCGATACGGC CGAGGCCATG TCGCAGATGC TGGAGATCCT TGGCCACACC GTCACCGTTG CCAATGGCGC GCGCACGGCC ATGCAAGCCG CGGAGTCTGG CGCGTTCGAT CTGCTGATCA GCGATATTGG TCTGCCGGAC GGCAGCGGCC TGGACGTGGT GCGCGTATTT GCCGAGCGGC AAGCTGCCCC ATCGATTGCC ATCACCGGCT ACGGCATGGA AGACGATATT GCCCGGTGCC GCGACGCGGG CTTTACCGAT CACCTGACCA AGCCGGTGGA CTTCAAGCGG TTGGAAACGC TGTTGGCCGG CTATTTGGCC GCGCGCGACG CGCGGACCGC GGGCGTGGAC GCAAGCTAG
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Protein sequence | MPNLQLLLVE DNPLDAELTR ARLETANLQA DITLVDNETD FIAQLSARTF DAILADYMLP QFTGAEALDI ARRMAPQTPF IFVSGALGEE HAVDMLKRGA TDYVIKQRLQ RLPVVLLRAL AEAAERRQRI AAEAALREAE THFRLLINAL KEHAVLSLDP QGIVRTWNAA SRSILGYARE DILGKSAEIL YPQAAREAGE FQRKLERVRR EGSLTDDRWM LRKDGTPFYA SSVVTAIHNE TGQLVGFSKI IRDSTEERIA ADALRRAKEE AETANHAKDH FLAVLSHELR TPLTPILTAV HLLELRQDLP AYAVAQLEVV RRNAELEARL IDDLLDITGI ARGKLAVSFA LVDLYPLLES TLEISRNDMQ AKRLSLKTRF EAGRSRLYAD GARIQQVIWN LVRNAVKFTP EGGAIEVRVW NPSASTVAVS VKDNGIGIEP DALPRIFSAF EQADASITQR FGGLGLGLAI AYALVQKHEG SLIAESAGRH EGATFTLTLP LATEMVQPET PPSPPSPRAQ PTRGLHVLLV EDNADTAEAM SQMLEILGHT VTVANGARTA MQAAESGAFD LLISDIGLPD GSGLDVVRVF AERQAAPSIA ITGYGMEDDI ARCRDAGFTD HLTKPVDFKR LETLLAGYLA ARDARTAGVD AS
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