Gene Rpic12D_2795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2795 
Symbol 
ID8020466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2963895 
End bp2965853 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content66% 
IMG OID644831582 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002982738 
Protein GI241664378 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.950985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATC TTCAACTGCT GCTGGTCGAA GACAATCCGC TCGACGCAGA ACTTACGCGC 
GCACGGCTGG AAACCGCCAA CCTGCAGGCT GACATCACGC TGGTCGACAA CGAAACCGAC
TTCATCGCCC AACTGAGCGC GCGGACCTTC GACGCCATCC TGGCCGACTA CATGCTGCCG
CAGTTCACGG GGGCAGAGGC GCTCGACATT GCGCGCCGCA TGGCACCGCA AACGCCGTTC
ATCTTCGTAT CCGGTGCGCT GGGCGAGGAG CACGCGGTGG ACATGCTCAA GCGTGGCGCC
ACCGATTACG TCATCAAGCA GCGACTGCAA CGCCTGCCCG TGGTGCTGCT GCGGGCGCTG
GCCGAGGCGG CCGAACGCCG CCAGCGCATC GCCGCAGAAG CTGCCCTGCG CGAAGCGGAA
ACGCACTTCC GATTGCTGAT CAATGCGCTC AAGGAGCACG CCGTGCTCTC GCTCGACCCG
CAGGGCATCG TGCGTACGTG GAACGCCGCG TCGCGCAGCA TTCTCGGGTA TGCGCGTGAA
GACATCCTAG GCAAGTCGGC CGAGATTCTC TACCCGCAAG CCGCGCGCGA GGCCGGTGAA
TTCCAGCGCA AGCTCGAACG CGTGCGCCGC GAAGGCAGCC TCACCGACGA CCGCTGGATG
CTGCGCAAGG ACGGCACGCC GTTCTACGCA TCCAGCGTGG TCACCGCCAT CCACAACGAG
ACGGGGCAAC TGGTCGGCTT CTCGAAGATC ATCCGCGACT CGACGGAAGA GCGCATCGCC
GCAGACGCCC TGCGCCGTGC CAAGGAAGAA GCCGAGACCG CCAACCACGC CAAGGACCAC
TTCCTGGCCG TGCTCTCGCA TGAGCTGCGC ACGCCGCTTA CGCCCATCCT GACCGCCGTG
CATCTGCTGG AGCTGCGCCA GGATTTGCCG GCGTATGCGG TCGCGCAGCT CGAAGTCGTG
CGCCGCAATG CCGAGCTGGA AGCGCGCCTG ATCGACGACC TGCTCGACAT CACCGGCATT
GCGCGCGGCA AGCTGGCCGT GAGCTTTGCG CTGGTCGACC TGTATCCGCT TTTGGAGAGC
ACGCTGGAGA TATCGCGCAA CGACATGCAG GCCAAGCGGC TCTCGCTCAA GACGCGCTTC
GAGGCGGGCC GCAGCCGGCT GTACGCGGAC GGCGCGCGCA TCCAACAAGT GATCTGGAAC
CTGGTGCGCA ACGCGGTCAA GTTCACGCCC GAAGGCGGCG CCATCGAGGT GCGCGTCTGG
AACCCGTCGG CCTCCACCGT GGCCGTGTCC GTGAAGGACA ACGGCATCGG CATTGAGCCC
GACGCGCTAC CGCGCATCTT CTCGGCGTTC GAGCAGGCCG ATGCATCGAT CACACAGCGC
TTTGGCGGGC TTGGCCTGGG CCTGGCGATT GCCTATGCGC TGGTGCAGAA GCATGAGGGT
TCATTGATCG CTGAGAGCGC CGGCCGCCAC GAGGGCGCCA CGTTCACACT CACGCTGCCG
CTGGCCACCG AGATGGTGCA GCCCGAGACG CCGCCGTCGC CGCCCTCGCC ACGCGCCCAA
CCGACGCGCG GCCTGCACGT GCTGTTGGTG GAAGACAACG CCGATACGGC CGAGGCCATG
TCGCAGATGC TGGAGATCCT TGGCCACACC GTCACCGTTG CCAATGGCGC GCGCACGGCC
ATGCAAGCCG CGGAGTCTGG CGCGTTCGAT CTGCTGATCA GCGATATTGG TCTGCCGGAC
GGCAGCGGCC TGGACGTGGT GCGCGTATTT GCCGAGCGGC AAGCTGCCCC ATCGATTGCC
ATCACCGGCT ACGGCATGGA AGACGATATT GCCCGGTGCC GCGACGCGGG CTTTACCGAT
CACCTGACCA AGCCGGTGGA CTTCAAGCGG TTGGAAACGC TGTTGGCCGG CTATTTGGCC
GCGCGCGACG CGCGGACCGC GGGCGTGGAC GCAAGCTAG
 
Protein sequence
MPNLQLLLVE DNPLDAELTR ARLETANLQA DITLVDNETD FIAQLSARTF DAILADYMLP 
QFTGAEALDI ARRMAPQTPF IFVSGALGEE HAVDMLKRGA TDYVIKQRLQ RLPVVLLRAL
AEAAERRQRI AAEAALREAE THFRLLINAL KEHAVLSLDP QGIVRTWNAA SRSILGYARE
DILGKSAEIL YPQAAREAGE FQRKLERVRR EGSLTDDRWM LRKDGTPFYA SSVVTAIHNE
TGQLVGFSKI IRDSTEERIA ADALRRAKEE AETANHAKDH FLAVLSHELR TPLTPILTAV
HLLELRQDLP AYAVAQLEVV RRNAELEARL IDDLLDITGI ARGKLAVSFA LVDLYPLLES
TLEISRNDMQ AKRLSLKTRF EAGRSRLYAD GARIQQVIWN LVRNAVKFTP EGGAIEVRVW
NPSASTVAVS VKDNGIGIEP DALPRIFSAF EQADASITQR FGGLGLGLAI AYALVQKHEG
SLIAESAGRH EGATFTLTLP LATEMVQPET PPSPPSPRAQ PTRGLHVLLV EDNADTAEAM
SQMLEILGHT VTVANGARTA MQAAESGAFD LLISDIGLPD GSGLDVVRVF AERQAAPSIA
ITGYGMEDDI ARCRDAGFTD HLTKPVDFKR LETLLAGYLA ARDARTAGVD AS