| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2793 |
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| Symbol | |
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| ID | 8020464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2961084 |
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| End bp | 2963375 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831580 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002982736 |
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| Protein GI | 241664376 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.172208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.714834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGC AATCGCCCCC GCCCTTGTCT GCAGTTGACG ACATCGACGC CTCGCCCGGA
ATTGGCAGCA ACGCTGCCAT CCAGTCGCGC GGAGTGTTGC TGTGCCTGTC CGAACCCGAT
CTACGCATCC AACAGGTCAG CGAAAACCTC GAGACCGCGC TGGGAACACC GCTGGCCGCC
GCGCTGCAGG CGCCGGTTGA CCATGTGACG GGTGCCGCGG GCCGCGAGGT GCTGGAGCGC
GCGCTGGCCA CGCAGAGCAT CGACGGCCAC CCGCTCTACA TCGGTACGCT GCAGACGCCG
CACGGTCATG CGCTCGACGC GGTGGTGCAC CGTCACAAAG GCACGCTCAT TCTTGAGCTC
GAACCTGCCG TGCATGCCGC CGACGGCGCG TTTGTGTCGA TGTACCCGCT GGTCCGGACG
TTCGTCGGCA GCCTGCAAGC CGCAGGCACG ATCGATGCCC TGACCGACCT GGCTGCACGC
GAGGTTCGCC GCCTCACCAA CTTTGGCCGC GTGACGATCT ACCGGATCGA CAGCGACGGC
TCCTTGCAGG CGCTGGCGGA AGCGCGTGAC GTTGCTTACG ACACGCTGGT CGGGACGCAT
TGGCGCGGCG ACGGCATGGC GCCCGAACTG CGCAGCCTGT ACAGCCACAA CCCGTTGCGT
CTGGTGGCGG ACGTGGACGA CACGCCCGTA GGTCTGGTGC CGCCACTGCA TCCGTCCACC
GGGCGGGCCA CCGACCTGAC CTATGCAGCC CTGCGCGCCG CGTCCGAAGC GCAGCGGGGA
ACCATGCGCG GCATGGGCGC GAGGGCGTCC CTCACGCTGG CACTGACCGT GCGCGGGAGT
CTCTGGGGGC TGATCGCCTG CCACCATGCC ACGCCCTGTT CGCTCTCTTT CGAAGTGCGT
ACGGCATGTG AACACCTGGC ACAGATCCTG TCGCTGCAGA TCGAAGCGAA GGAAGACCGC
GCAGAAATCG CCCACCGGCT GGAACTGCGG CGCATCCTGG TGCGCTTGCT GGCCGCGATG
TCCGACCGCG ACCATTTCGA GGATGGCCTG ATCGAGCATC CTGCCGATCT GCTGCGCTTT
GCCTCGGCCA GCGGCGCGGC CATCGTGCGC CAGGGCGAAT GCGTGCGCAT CGGCGCAGCG
CCCGATGAGG CCAGCATCCT GCGGCTCACC GAATGGCTTG CCAAGGAGCG CCCCGGCGAG
GTGTTCCACA CCGACCGGCT GGCCAGTATC TATCCGGACG GCGCCGCGCT GCTGCCGCAG
GCCAGCGGCG TGCTGGCCGT GCAGGTTTCG CAGCTGCATC GTCACTACGT GCTGTGGTTC
CGCCCCGAAA CCCCGCACAC GGTGCGCTGG GCGGGCGACC ACGCACCGCA CGTGAGCATC
GATGACGACA GCCACCACAT TCTGGGTCGC ACGCGCCATT GGCAGGAGCA CATCGCACAC
ACGTCGCGGC CGTGGCGCAC GAGCGAAGTG GAAACTGCCT CGGAGTTCCG CTATGCCGTC
CTGAACATCG TGCTGCGCCG CGCTGAAGAA GCCGCGGAGC TGACCAGCGA ACTGCGCCGC
GCCAACCACG AACTCGAAGC ATTTTCGTAT TCCGTATCGC ACGACTTGCG CGCACCGCTG
CGCCACATCG CCGGCTACGC CGAACTGCTC GACGAAATGG AGGGCCAGCA CGTGTCGGAG
CGGGGGCGGC ACTTTCTGCA GACGATTTCC GAGTCGTCGC GTTTTGCGGG CAAGCTCGTC
GACGACCTGC TTACCTTCTC GCAGATGGGC CGCGGCGCGC TTCACCTGAC CGATGTCGAC
CTTGCCCTGC TGGTGCGCGG CGTGGTGCGC GATCTGACGG TAGACCAGGG GCGGCGCCAC
ATCGAATGGA ACATCGCCGC CTTGCCCGTG GTGCGCGCCG ACCCGGCATT CCTGCAACTG
GCGATGCGCA ACCTGCTCTC CAACGCCATC AAATACACAC GCGGCCGCGA GCCGGCGCGC
ATCCATATCG ACGCCGAACA GACTGACACA GAAACCATCG TGCGCATTGC CGACAACGGC
GTGGGGTTCT CGATGGAATA CGTGGCCAAG CTGTTCGGCG TGTTCCAGCG GCTGCATCGC
ATGGACGAAT TCGAGGGCAC CGGCATCGGA TTGGCCAATG TGCGGCGCAT CATCGATCGC
CACGGCGGCC GCACCTGGGC TGAGGGCGAG CTTGATCGCG GCGCCACGTT CTACTTTGCG
CTGCCGCGCG CGCCCCACCC GCTGGCGGCA TCCGGGACCG GCCTCCGCAC GCCCGTGACC
CGCGATGCCT GA
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| Protein sequence | MSSQSPPPLS AVDDIDASPG IGSNAAIQSR GVLLCLSEPD LRIQQVSENL ETALGTPLAA
ALQAPVDHVT GAAGREVLER ALATQSIDGH PLYIGTLQTP HGHALDAVVH RHKGTLILEL
EPAVHAADGA FVSMYPLVRT FVGSLQAAGT IDALTDLAAR EVRRLTNFGR VTIYRIDSDG
SLQALAEARD VAYDTLVGTH WRGDGMAPEL RSLYSHNPLR LVADVDDTPV GLVPPLHPST
GRATDLTYAA LRAASEAQRG TMRGMGARAS LTLALTVRGS LWGLIACHHA TPCSLSFEVR
TACEHLAQIL SLQIEAKEDR AEIAHRLELR RILVRLLAAM SDRDHFEDGL IEHPADLLRF
ASASGAAIVR QGECVRIGAA PDEASILRLT EWLAKERPGE VFHTDRLASI YPDGAALLPQ
ASGVLAVQVS QLHRHYVLWF RPETPHTVRW AGDHAPHVSI DDDSHHILGR TRHWQEHIAH
TSRPWRTSEV ETASEFRYAV LNIVLRRAEE AAELTSELRR ANHELEAFSY SVSHDLRAPL
RHIAGYAELL DEMEGQHVSE RGRHFLQTIS ESSRFAGKLV DDLLTFSQMG RGALHLTDVD
LALLVRGVVR DLTVDQGRRH IEWNIAALPV VRADPAFLQL AMRNLLSNAI KYTRGREPAR
IHIDAEQTDT ETIVRIADNG VGFSMEYVAK LFGVFQRLHR MDEFEGTGIG LANVRRIIDR
HGGRTWAEGE LDRGATFYFA LPRAPHPLAA SGTGLRTPVT RDA
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