Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2780 |
Symbol | |
ID | 8020451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2946574 |
End bp | 2947761 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644831567 |
Product | oxidoreductase domain protein |
Protein accession | YP_002982723 |
Protein GI | 241664363 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.779998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.106115 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGG CCATGGAACA GCGCCGTTTG CGCATCGGGG TGGCAGGACT GGGGCGCGCC TTTTCGCTGA TGCTGCCCAC CTTCCTGCAG GACCCGAGGG TTCAACTCGT CGCCGCATGC GACCCGCGCG AGGAAGCACG GCAGCAGTTC GCCGCCGATT TCGGCGCACG GACCTACGCA GACGTGCGGG ACCTGGCCGG CGACCCCGAT GTGGAAGTCA TCTACGTGGC CAGCCCCCAT CAGTTTCACG CGCAGCACAC TGAGATTGCC GCAGCCAACG GCAAACACGT ACTGGTCGAG AAGCCGATGG CGCTCAAAGC GGCCGACTGC GATCGCATGA TCGCCGCGTG CTGGGCGGCA AACGTGCATC TAATCGTCGG ACACTGCCAC AGCTTCGATA CGCCGTATCT CCGTACGCGC GACCTGATCC GTTCGGGCGA TTTCGGTGCG GTGAAGATGA TCCAGGCGTT CAACTACACG GATTATCTAT ACCGGCCGCG CCGCTCGGAA GAACTCATGA CGGCCGAAGG TGGCGGTGCC GTATTCAGCC AGGCGGCGCA CCAGGTCGAC ATCGTGCGGA TGCTCGCGGG CTCGCGCGCG ACGCGCCTGC GCGCAAGCGT CGGCCGGTGG GATTCGAAGC GCCCCACCGA AGGCGCGTAT TCGGCACTGA TCTGGTTCGA GAATGGCGCC TATGCTTCGC TGTCGTACAG CGGGTATGGC CACTTCAACA GCGACGAGTG GATGAGCTGG ATCGGCGAGA TGGGTGACCA GGCAAGTCCC GACGCCTACG GCGCCGCCCG GAGGCGGCTG GCGACCATCG CCTCATCCAA TGATGAAGCA CAGCTCAAGG CGGCCGGTAC GTATGGCGGC GCCGCATACA AGCCGCCCTC GACCGCGGCA GTGGAGGCGG CACGCCACCA TCAGCATTTC GGCCCGGTGA TCGTGGCGTG CGAACACGCC GACCTGCGCC CCCTGCCCGA TTCCATCATC GTGTACGGTG ATCACCAACG GGAGACGCTG CCGCTTTCCC TCCCCACCGT GCCGCGCGGC GAAGTGATTG ACGAACTCTA CGAAGCCATC ATCGCTGGGC AGGCGCCTCT TCATAACGGC GAGTGGGCAA AGGGCACGCT GGAGATTTGC ATCGCCATCC TGGAGTCGAG CGAAACCGGC AAAGACGTGT CGCTCTGA
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Protein sequence | MKPAMEQRRL RIGVAGLGRA FSLMLPTFLQ DPRVQLVAAC DPREEARQQF AADFGARTYA DVRDLAGDPD VEVIYVASPH QFHAQHTEIA AANGKHVLVE KPMALKAADC DRMIAACWAA NVHLIVGHCH SFDTPYLRTR DLIRSGDFGA VKMIQAFNYT DYLYRPRRSE ELMTAEGGGA VFSQAAHQVD IVRMLAGSRA TRLRASVGRW DSKRPTEGAY SALIWFENGA YASLSYSGYG HFNSDEWMSW IGEMGDQASP DAYGAARRRL ATIASSNDEA QLKAAGTYGG AAYKPPSTAA VEAARHHQHF GPVIVACEHA DLRPLPDSII VYGDHQRETL PLSLPTVPRG EVIDELYEAI IAGQAPLHNG EWAKGTLEIC IAILESSETG KDVSL
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