Gene Rpic12D_2777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2777 
Symbol 
ID8020448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2942536 
End bp2944131 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content57% 
IMG OID644831564 
Producthypothetical protein 
Protein accessionYP_002982720 
Protein GI241664360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0685332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.576381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC TCACTCAAGG TGCCGTCAGC CGGGGAATTT CGCTGTTCGA GTTGTTCTGC 
AACCCTCAGG TGCTCAGCGA GGAATCGGCG GAATTGAACA GCAGCTACGC CAACACCGTG
CGAGCCTTGC TTCGGACACT GTGGCGCCAC CGTGACTTCC TCAAGATTGG GCTCGAAATC
CGCTTGAAGC AACTGGTTGA GGTCATCAAG GAATCTGCCC CAGGAGAGGC GAAAGACCGC
CAAACGCCCA TCATCCCATC CCGCATCTAC TGCGCGATCT TATCTAGCCT GCTGGACCGT
CTGGATGAGA TCGAGTCTGA CCTAGATACT CTACTGGATG CTTACCGGCA AGAGCGCACG
TGCACGCTCA GTGCCTCAAG CTGCCTGACC GACAAGCAGC GATATATGCA ACGCGAAATG
CAACTCCAAG GGATGCTGGA GGCTATGCGG AACAGGGGAT GGAAGACGGG AAGCATGCGC
GGATTCGTCG CCGGCGAGAT CGCCGTAGTC CAACTTAGGC TGATGTGCAT CGTAATCGCC
TTCACCGGCA TGCGAGTAGC GGAAGCGCAG ATCCTGCCGC TCAAAGGAGT TCTGGAGGAG
GCGAAACACC GTGACACGGT GCACCACGTG GTCAACGGAT ACAGTCACAA GCTCAACGGT
GGCAGAAAGA AGCGCGCCAG TTGGATCACA AGCCGCGAGG GCCATCGGGC AATCTTGCTC
GCTCAAAGAA TCGCCTCGGT CATCTTGGAG GTACTGAAAG ATGGTGATCC AGCAAACGAT
GACGCCGCCT TACTGTTCTG TTCGACGGCC AATCCTTACA AGAAGCAGAG TCTTTCGAGC
ATTTACAGAC GTCTGCACGG CCAGTTGTTC CCTGAGATTT GCCCCCTCAT TACGCAAGCC
GACATCGACG AACTCAACGC AATGGAGTTG CAGCGGAACT GGCTGCGTGA GGGCATGGAG
GTCGGCAAAC CGTGGCCGCT GGCCTTTCAC CAATACCGGC GCAGCCTGTC GGTTTATGCC
CATCGCTCGG GCATGGTGAG CCTGCCGGCG CTCAAAGGAC AGCTGCAGCA CATCACCGAT
GAGATGCGCG CGTACTACAG CGATGGGTTC TGCCGGGCAG TCAACCTCGT CTTCGACAAG
GAGCACTTTA GCCATGATTG GAACGCCGCC AAGTCGGAAT CGAGCTTCCT CGCTTACAGC
TTAGCCTTGC TGTTCTCGGA CGAAGACCTC ATCGGCGAAG TGGGTGGACG GGGCGCGGTC
CGAATGCAGC AAACTGTATC CAGCCGATCC AAGGAAGAGA CACTGAAACT GTTTCGTGAT
GGCAAGCTGG CCTATCGCGA AACCGTTCTG GGCGGTTGCA TCGCCGTGGA GGACTGCAAT
CGCACACCGC TGGAGCCCAT TCCTTGGGAC TGCCTGGAGA AAGACTGCAC CAACGCGGTG
GTGTTTGAAA AACGTCTGGG TCTGTTGATC AAGACGCAGG AGACGGTTGT CGCCACGCTG
GCCAGCACAG AAGCGGGCGG CGTTGAGCAC CGCCTGGAAG CCGATCACCT GCAAGTGCTT
CTTAAAGCTC GCAAACGCCT CTCGGAAGCT GTATGA
 
Protein sequence
MNRLTQGAVS RGISLFELFC NPQVLSEESA ELNSSYANTV RALLRTLWRH RDFLKIGLEI 
RLKQLVEVIK ESAPGEAKDR QTPIIPSRIY CAILSSLLDR LDEIESDLDT LLDAYRQERT
CTLSASSCLT DKQRYMQREM QLQGMLEAMR NRGWKTGSMR GFVAGEIAVV QLRLMCIVIA
FTGMRVAEAQ ILPLKGVLEE AKHRDTVHHV VNGYSHKLNG GRKKRASWIT SREGHRAILL
AQRIASVILE VLKDGDPAND DAALLFCSTA NPYKKQSLSS IYRRLHGQLF PEICPLITQA
DIDELNAMEL QRNWLREGME VGKPWPLAFH QYRRSLSVYA HRSGMVSLPA LKGQLQHITD
EMRAYYSDGF CRAVNLVFDK EHFSHDWNAA KSESSFLAYS LALLFSDEDL IGEVGGRGAV
RMQQTVSSRS KEETLKLFRD GKLAYRETVL GGCIAVEDCN RTPLEPIPWD CLEKDCTNAV
VFEKRLGLLI KTQETVVATL ASTEAGGVEH RLEADHLQVL LKARKRLSEA V