| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2766 |
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| Symbol | |
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| ID | 8020437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2930065 |
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| End bp | 2931936 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831553 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_002982709 |
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| Protein GI | 241664349 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.612907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA TGAAGCCGAT CCGCTACACC ATCGCCCCCG CCGCGCCCGA GGCGCACGTT
TTCACCGTCA CCGTCACGGT TGACGCGCCT GACAGCCAAG GCCAGCGATT TTCGCTGCCG
GCGTGGATTC CGGGCAGCTA CATGATCCGC GAGTTCGCGC GCAACATCGT GCGGATCGAG
GCGTCGTCCG CCCACAGGCC GGTGCGCCTG ACCAAGGTCG ACAAGCACAC GTGGTGGGCC
GCACCGTGTA CCGGGCCGCT GACGATTTCC TACGACGTCT ATGCGTGGGA CTTGTCGGTG
CGCGCCGCGC ATCTGGATAC CACGCACGGC TTCTTCAACG GCACGTCGGT GTTCCTGCGT
GTGGAAGGCG CGGATGACCA GCGTTGCCTG GTCGACATCC AGCCGCCCGC CGGAGATGCC
TACCGCGGCT GGCGCGTGGC CACCGCGCTG CGCGAGGCCA CTGGGCGCAT CGCGGGCAAG
GCCGGCGCCA AGCGCTACGG CTTTGGCTGG TACGAAGCGG CAAATTACGA TGAGCTGATC
GACCACCCGG TGGAGATGGG CACGTTCGAG CTGGTGTCGT TCGAGGCCTG CGGTGCACAG
CACGACGCCG TCTTTACGGG CCGCGTGCCG AATCTTGATC TGGAACGCAT CGCCCGCGAT
TTCAAGCGCA TCTGCGAAGC GCAGATCCGC CTGTTCGAGC CGCAGACCGC CACGGCGCCG
TTCCTCGACA GCAACCGGCG CTACGTCTTC ATGACGATGG TGACCACCGA CGGCTATGGC
GGCCTGGAAC ACCGCGCCAG CACCGCATTG ATGTGTGCGC GCGCCGATCT GCCCGTGACC
GGCCGCGATG AGACCACCGA GGGCTATCGC ACCTTCCTGG GCCTCGTCAG CCACGAGTAT
TTCCATACCT GGAACGTCAA GCGCATCAAG CCGGCCACCT TTGTGCCGTA CGCGCTCGAT
CGCGAGGTCC ACACGCCGCT GCTGTGGCTG TTTGAAGGCT TCACGAGCTA CTACGACGAT
CTGATGCTGG TGCGCTCGGG GCTGATTTCC GAAGCGCAGT ATCTGGAGAT GCTCGGCAAG
ACGTGGAACG GCGTGCTGCG CGGCAGCGGC CGCCTGAAAC AGAGCGTGGC CGAAAGCTCC
TTCGACGCCT GGACGAAGTA CTACCGCCAG GACGAAAACG CCCCCAACGC CATCGTCAGC
TACTACACCA AGGGCTCGCT CGTGGCGCTG GCGCTCGACC TCACGATCCG CACGCAGACC
CACGGCGAAC GCTCGCTCGA CGACGTGATG CGCGCCCTGT GGGTGACGTA CGGCCGTGAT
TTCTACGCCG CGGGCCACGC GCAGCGCGGC GTGACCGAAG CCGGGCTCAT CACCCTGATG
GAAGAGACCA CCGGTGTGCG CCTGCGCACG CTGGTCCGCC AGTTGACCGA GGGGCGCGAC
GACCCGCCGC TGCCGGCGCT GTTCAAGGCG ATGGGCGTCA GCGCCACGCG CAAGGCGGCA
GACCCCGCGC TTGCCCTGGG CGTCAAGATC GGCGCCGAGA ACGGCTACGT CAAGCTGCAG
CAGGTCTTCG ACGACAGCCC CGCGCAGCAA GGCGGTCTGT CTGCAGGCGA CCTGGTCGTC
GCGGTAGACG GCCTGCGTGT GCCGACCGGC CAGCTCGACA AGATGCTCGC GCGCCACCGC
GCCGGCGACA CCGTTCCCGT GCATGTGTTC CGTCGCGACG AATTGATGCA GCTTGACGTA
ACGCTCGCTG CCGACGCCAC GCCGCAGTTC ACGCTGGCGC TCGCGTCCGA GCCGTCGCCG
CTGCGCTCGG CATGGCTCGG CAAACGGGCA GCGGCGCGCA GCACGCGCGC GGCACGCGGT
AAGTCAGCCT GA
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| Protein sequence | MSAMKPIRYT IAPAAPEAHV FTVTVTVDAP DSQGQRFSLP AWIPGSYMIR EFARNIVRIE
ASSAHRPVRL TKVDKHTWWA APCTGPLTIS YDVYAWDLSV RAAHLDTTHG FFNGTSVFLR
VEGADDQRCL VDIQPPAGDA YRGWRVATAL REATGRIAGK AGAKRYGFGW YEAANYDELI
DHPVEMGTFE LVSFEACGAQ HDAVFTGRVP NLDLERIARD FKRICEAQIR LFEPQTATAP
FLDSNRRYVF MTMVTTDGYG GLEHRASTAL MCARADLPVT GRDETTEGYR TFLGLVSHEY
FHTWNVKRIK PATFVPYALD REVHTPLLWL FEGFTSYYDD LMLVRSGLIS EAQYLEMLGK
TWNGVLRGSG RLKQSVAESS FDAWTKYYRQ DENAPNAIVS YYTKGSLVAL ALDLTIRTQT
HGERSLDDVM RALWVTYGRD FYAAGHAQRG VTEAGLITLM EETTGVRLRT LVRQLTEGRD
DPPLPALFKA MGVSATRKAA DPALALGVKI GAENGYVKLQ QVFDDSPAQQ GGLSAGDLVV
AVDGLRVPTG QLDKMLARHR AGDTVPVHVF RRDELMQLDV TLAADATPQF TLALASEPSP
LRSAWLGKRA AARSTRAARG KSA
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