Gene Rpic12D_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2762 
SymboltrpC 
ID8020433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2925183 
End bp2925986 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID644831549 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_002982705 
Protein GI241664345 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA TCCTGCAGAA AATCCTGGCC GTGAAGGCCG AAGAAGTGGC CGCCGCGCGC 
AAGCACCGCG ACCTGCCCAG CGTGCGCGCC GAAGCCGAAG CCAACCGCAC CGACAGCACG
CTCGGCGCCC GCGGCTTTGC CAAGGCAATG CGCGACAAGA TCGCCGCCGG CAACGCGGCG
ATCATCGCCG AAGTGAAAAA GGCGTCGCCG TCCAAAGGCG TGCTGCGCCC GAACTTCAAG
CCCGCCGACA TCGCCCGCAG CTATGCCGAG TACGGCGCCG CGTGCCTCTC CGTCCTGACC
GACGAGCAGT TCTTTCAAGG CCACGCCGAT TACCTGCGCG AAGCCCGCGC CGCCTGCACG
CTGCCGGTGC TGCGCAAGGA TTTCATGGTC GACTTGTACC AGGTGTACGA AGCGCGCTCA
TGGGGCGCGG ACTGCATCCT GCTGATCGTG GCCGCGCTGG ATCAGGGCCT GATGGAAGAA
CTCGAAGCGT GCGCGCTGGA ACTCGGCATG GACGTGCTGG TAGAAGTGCA CGACGGCCAC
GAACTGGACC GCGCGCTGCG TCTGCAAACG CCGCTGGTGG GCGTGAACAA CCGCAACCTC
CGCACGTTCG AGACGTCGCT CGACAACACT CTCGGCCTGC TCAAGCACAT GCCGGACGAT
CGCATCGTCG TCACGGAATC CGGCATCCTC ACGCCGGACG ACGTGCGCAA GATGCGCGCC
GCCGCCGTCA ACGCGTTCCT CGTCGGCGAA GCCTTCATGC GTGCAGACGA CCCGGGCGCC
GAACTGGCCC GCCTGTTCGC CTGA
 
Protein sequence
MSDILQKILA VKAEEVAAAR KHRDLPSVRA EAEANRTDST LGARGFAKAM RDKIAAGNAA 
IIAEVKKASP SKGVLRPNFK PADIARSYAE YGAACLSVLT DEQFFQGHAD YLREARAACT
LPVLRKDFMV DLYQVYEARS WGADCILLIV AALDQGLMEE LEACALELGM DVLVEVHDGH
ELDRALRLQT PLVGVNNRNL RTFETSLDNT LGLLKHMPDD RIVVTESGIL TPDDVRKMRA
AAVNAFLVGE AFMRADDPGA ELARLFA