Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2762 |
Symbol | trpC |
ID | 8020433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2925183 |
End bp | 2925986 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831549 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_002982705 |
Protein GI | 241664345 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA TCCTGCAGAA AATCCTGGCC GTGAAGGCCG AAGAAGTGGC CGCCGCGCGC AAGCACCGCG ACCTGCCCAG CGTGCGCGCC GAAGCCGAAG CCAACCGCAC CGACAGCACG CTCGGCGCCC GCGGCTTTGC CAAGGCAATG CGCGACAAGA TCGCCGCCGG CAACGCGGCG ATCATCGCCG AAGTGAAAAA GGCGTCGCCG TCCAAAGGCG TGCTGCGCCC GAACTTCAAG CCCGCCGACA TCGCCCGCAG CTATGCCGAG TACGGCGCCG CGTGCCTCTC CGTCCTGACC GACGAGCAGT TCTTTCAAGG CCACGCCGAT TACCTGCGCG AAGCCCGCGC CGCCTGCACG CTGCCGGTGC TGCGCAAGGA TTTCATGGTC GACTTGTACC AGGTGTACGA AGCGCGCTCA TGGGGCGCGG ACTGCATCCT GCTGATCGTG GCCGCGCTGG ATCAGGGCCT GATGGAAGAA CTCGAAGCGT GCGCGCTGGA ACTCGGCATG GACGTGCTGG TAGAAGTGCA CGACGGCCAC GAACTGGACC GCGCGCTGCG TCTGCAAACG CCGCTGGTGG GCGTGAACAA CCGCAACCTC CGCACGTTCG AGACGTCGCT CGACAACACT CTCGGCCTGC TCAAGCACAT GCCGGACGAT CGCATCGTCG TCACGGAATC CGGCATCCTC ACGCCGGACG ACGTGCGCAA GATGCGCGCC GCCGCCGTCA ACGCGTTCCT CGTCGGCGAA GCCTTCATGC GTGCAGACGA CCCGGGCGCC GAACTGGCCC GCCTGTTCGC CTGA
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Protein sequence | MSDILQKILA VKAEEVAAAR KHRDLPSVRA EAEANRTDST LGARGFAKAM RDKIAAGNAA IIAEVKKASP SKGVLRPNFK PADIARSYAE YGAACLSVLT DEQFFQGHAD YLREARAACT LPVLRKDFMV DLYQVYEARS WGADCILLIV AALDQGLMEE LEACALELGM DVLVEVHDGH ELDRALRLQT PLVGVNNRNL RTFETSLDNT LGLLKHMPDD RIVVTESGIL TPDDVRKMRA AAVNAFLVGE AFMRADDPGA ELARLFA
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