Gene Rpic12D_2750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2750 
Symbol 
ID8020421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2914944 
End bp2915732 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID644831537 
Productenoyl-CoA hydratase 
Protein accessionYP_002982693 
Protein GI241664333 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID[TIGR02280] phenylacetate degradation probable enoyl-CoA hydratase paaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00030401 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC CGACCATTCT GCTTGACTGG CATGAACACG TGGCCACCAT CACGCTGAAC 
CGGCCCGATC AGCTCAACAG CTTCACGGCC GGCATGCACA GGGAACTGCG CGACGCGCTG
GACAAGGTGG AGCGCCAGCG CGCCCGCGCC TTGATCCTGA CCGGTGCGGG CCGCGGCTTC
TGCGCAGGGC AGGATCTCTC CGAACTCAAT TTCACGCCCG GGCAGATGAC CGACCTGGGC
CAGCTCATCG ACGAGCAATT CAACCCACTG GTGCGCCGTC TGCGCGCCAT GCCCCTGCCC
GTGATTGCCG CTGTGAATGG CGTAGCCGCC GGCGCGGGCG CCAACCTGGC ACTGGCGTGC
GACATCGTGA TGGCGGCCGA GAACGCGTGC TTCCTGCAAG CCTTCGTGAA GATCGGCCTG
CTGCCGGATT CGGGCGGGAC GTGGTTCCTG CCGCAGCGCA TCGGGGTGGC ACGGGCGATG
GGGCTGGCAA TGCTGGGGGA GAAGCTCGAC GCCAAGACCG CGCTCGCCTG GGGCCTGATC
TGGGGCGTCT ATCACGACGC AAAAATTCTG ATGACTGAGG TGAACTGCAT GGCCGACCAC
CTGGCCAAGC AGCCGACACG GGCGCTGGCC GCCATCAAGC GCGCCATGCA CGCGGCGCCC
ACACAGTCGC TGGACGCCCA GCTTGATCTG GAGCGCGACT TGCAGCGCGA ACTCGGCAAT
TCCCGCGACT ATGCAGAGGG GGTCGACGCG TTCCTCAACA AGCGCGTGGC GCATTTCACC
GGCGAATAA
 
Protein sequence
MTSPTILLDW HEHVATITLN RPDQLNSFTA GMHRELRDAL DKVERQRARA LILTGAGRGF 
CAGQDLSELN FTPGQMTDLG QLIDEQFNPL VRRLRAMPLP VIAAVNGVAA GAGANLALAC
DIVMAAENAC FLQAFVKIGL LPDSGGTWFL PQRIGVARAM GLAMLGEKLD AKTALAWGLI
WGVYHDAKIL MTEVNCMADH LAKQPTRALA AIKRAMHAAP TQSLDAQLDL ERDLQRELGN
SRDYAEGVDA FLNKRVAHFT GE