| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2745 |
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| Symbol | |
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| ID | 8020410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2902402 |
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| End bp | 2904117 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644831526 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_002982688 |
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| Protein GI | 241664328 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.853205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACC TGCTGGCAAT TCTCGGTGCA GACGGCCGCA CCACCCGCGC GATGCTCGCC
GGCGCAGCCC TGCGCCACGC GGCGCGCGAA TCCGGCTACA AGCTCGACGT CGACGTGCGC
GGCCCGGACA CCGCCTCGGT CGTCGACACG GCGGCCCTGG CCACCGCCAA AGCCGTTGTC
TGGGCGGGCC TGTCGCCAGA TGCCGCCGCC CGTGACGCCA ATCCGCGTAC GCTTGAAGTC
ACACTTGACG AGGTGCTCGC CGACGCCCGC GCCGTACTGG CCCGCGTGAT GCATAGCGCC
TCGCTCGCGC CAGAATCCGC TACCCAAGCT CGGCGCATTG TCGCCATCAC GTCGTGCCCG
ACCGGCATCG CGCACACCTT CATGGCTGCC GAGGCGCTCA CGCAGGCCGC CGGCGCGCTC
GGTCACACGA TCCACGTGGA AACGCAGGGT TCGGTGGGCG CACAGAACAC GCTGTCGGCC
GATGCCATCG CAACCGCAGA CCTCGTGCTG ATCGCGGCCG ACACGCAAGT CGACCTGTCA
CGCTTTGCCG GCAAGCGCGT CTTCCGCGCC GGCACCAAGG CGGCCATCCA CGATGGGCAG
GCATTGATCC GCCGGGCCTT CGACGAAGCC TCGCTAGAAG GCGCGGGGAC GGCGCAATTG
GCGGGCACCG CGGCCGCCGC GGCTGAACAG CAGCGCACCG GCCCGTACAA GCACCTGATG
ACTGGTGTGT CGTTCATGCT GCCCTTCGTG GTGGCGGGGG GCATCCTGAT TGCACTGGCG
TTCGCCCTCG GCGGCATCTA CGTGACGGAC GCCTCGGCCA GCCATACGCT TGGCGGCGCG
CTGTTCCAGA TCGGTGCCAA GTCCGCGTTT GCCTTGATGG TGCCCGTGCT CGCCGGATAC
ATCGCGTATT CGATCGCCAG CCGGCCGGGC ATCGCACCCG GGATGGTCGG AGGCATGCTC
GCCGCCAGCC TGGGCGCCGG GTTTCTTGGT GGCATCGTGG CCGGTTTCGT CGCCGGCTAT
GGCACCGAGG CGCTCAACCG CTGGCTGAAG CTGCCGCGCA ACCTGGAAGG GCTGAAACCG
GTGCTGATCC TGCCCGTGCT CGGGTGCCTT TTGACGGGCT TGGTGATGCT GTATGTGGTG
GGCGCGCCGG TTGCTGCGCT GCTTGCATCC CTGACGACCT GGCTGCGCGG CATGCAAGGC
GCGAACGCGG TCCCGCTGGG CGCGCTGCTG GGCGGCATGA TGGCGTTTGA CATGGGCGGC
CCCATCAACA AGGCTGCGTA TGCCTTCAGC ACCGGGCTGA TCGGCGCGCA GGTCTACACG
CCGATGGCGG CCACGATGGC CGCAGGCATG ACGCCGCCGT TGGGTATCGC GCTCGCGGCA
TGGCTCTTCC CGTCGCGATT CACGCGGGAC GAACGCCAGG CGGCGCGCCC CACCGCCGTG
CTCGGCCTCG CCTTCATCAG CGAGGGCGCG ATCCCGTATG CCGCGCGCGA CCCGTTCCGC
GTGATTCCCG CGCTGGTGAC GGGTTCCGCG TGCGCGGGTG CCCTGTCAAT GTTGTTCGGG
GTGGAACTGC GCGTGCCGCA CGGCGGGGCA TTCGTGCTGC CGATCCCGAA CGCGGTAACG
CACCTGGGCG GCTATGTTGC AGCGCTGGTT GCCGGCACCG TCGTCACCGC CGTGCTGCTG
GCAGTGATGA AGCGGCGGGT GGCGGAAGCC GCCTGA
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| Protein sequence | MANLLAILGA DGRTTRAMLA GAALRHAARE SGYKLDVDVR GPDTASVVDT AALATAKAVV
WAGLSPDAAA RDANPRTLEV TLDEVLADAR AVLARVMHSA SLAPESATQA RRIVAITSCP
TGIAHTFMAA EALTQAAGAL GHTIHVETQG SVGAQNTLSA DAIATADLVL IAADTQVDLS
RFAGKRVFRA GTKAAIHDGQ ALIRRAFDEA SLEGAGTAQL AGTAAAAAEQ QRTGPYKHLM
TGVSFMLPFV VAGGILIALA FALGGIYVTD ASASHTLGGA LFQIGAKSAF ALMVPVLAGY
IAYSIASRPG IAPGMVGGML AASLGAGFLG GIVAGFVAGY GTEALNRWLK LPRNLEGLKP
VLILPVLGCL LTGLVMLYVV GAPVAALLAS LTTWLRGMQG ANAVPLGALL GGMMAFDMGG
PINKAAYAFS TGLIGAQVYT PMAATMAAGM TPPLGIALAA WLFPSRFTRD ERQAARPTAV
LGLAFISEGA IPYAARDPFR VIPALVTGSA CAGALSMLFG VELRVPHGGA FVLPIPNAVT
HLGGYVAALV AGTVVTAVLL AVMKRRVAEA A
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