| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2736 |
|---|
| Symbol | |
|---|
| ID | 8020401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2889991 |
|---|
| End bp | 2891307 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644831517 |
|---|
| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
|---|
| Protein accession | YP_002982679 |
|---|
| Protein GI | 241664319 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTT CGACCTCTTC AACCATGGCG CCCTCCGCCC CCGGGGCGGC CACCGACACC
AGCCGCTCGC GCGTCGTCTT CGCCAGCTTC ATCGGCACGG CCATCGAGTT TTACGATTTC
TATGTCTATG CGACAGCCGC GGCGCTGGTC ATCGGCCCCG TGTTCTTTCC GCATGGGTCC
GCCACGGCAC AAGCGCTGTC GGCGTTCGTC ACGTTTGGTA TCGCGTTCAT CGCGCGGCCG
ATCGGCTCGT TTCTGTTCGG CCACTTTGGT GATCGCATCG GGCGCAAGTC GACGCTGGTG
GCGTCTCTGC TGGTGATGGG CATTTCGACC ACGCTGATCG GACTCGTGCC GGGGTACGAC
AGCATCGGCA CGCTCGCACC GATCCTGCTG TGCATCCTGC GCTTCGGCCA GGGCATCGGG
CTGGGTGGTG AATGGGGCGG CGCGGCGCTG CTGGCCACCG AGAACGCACC AGCCGGCAAA
CGCGCCTGGT TCGGCATGTT TCCGCAGCTC GGCCCGTCGG TCGGTTTCCT GGCTTCGAAC
GGTCTCTTCT TCGGGCTGGC GATCGCACTG TCCGATGAGC AGTTCCGCAG CTGGGGCTGG
CGCGTGCCGT TCCTGGTCAG CGCAGTGCTG GTGGCACTGG GCTTGTATGT GCGATTGAAG
ATCGCTGAGA CCCCCGCCTT CCAGGCAGCC ATCGACCGGC AGGAGCGCGT GAAGGTGCCG
GTCGCCACGC TGCTGGCGCA CCACTGGTGG CCGACGCTGC TGGGCGCACT GGCCATGGTC
GTCTGCTACA CGCTGTTTTA TATCTCGACG GTATTTTCGC TGTCGTACGG CGTGGGCACG
TTGCATTTCT CGCGCCCGAG CTTTCTGGGT CTGCTGTGCC TGGCCGTGGT GTTCATGGGG
CTGGCGACGC CGCTGTCGGC ATGGGCGTCC GACCGCTTTG GGCGCAAGCC GGTGCTGATC
GTCGGCATCA TCGCCGCCAT TTTGTCGGGC TTCACGATGG CGCCGCTGCT GGGGAGTGGG
CAGACACCGC TGGTGGCCCT GTTCCTCATC ATCGAACTGT TCCTGATGGG CGTGACCTTC
GCTCCGATGG GCGCGCTGCT GCCGGAGCTG TTCCCGACCA ACGTGCGCTA CACCGGGGCC
GGCGTGTCGT ACAACCTGGG CGGCATTCTA GGGGCGTCGA TTGCGCCCTA CATCGCGCAG
AAGCTGGCTC AGCAAGGCGG CCTGAGCTGG GTGGGCATGT ATGTGTCGGC GGCCGCGGTG
GTCAGCCTGA TCGGCGTGCT TTGCATGCGT GAAACGCGGG ATACCCGGCT GATGTAA
|
|---|
| Protein sequence | MSSSTSSTMA PSAPGAATDT SRSRVVFASF IGTAIEFYDF YVYATAAALV IGPVFFPHGS
ATAQALSAFV TFGIAFIARP IGSFLFGHFG DRIGRKSTLV ASLLVMGIST TLIGLVPGYD
SIGTLAPILL CILRFGQGIG LGGEWGGAAL LATENAPAGK RAWFGMFPQL GPSVGFLASN
GLFFGLAIAL SDEQFRSWGW RVPFLVSAVL VALGLYVRLK IAETPAFQAA IDRQERVKVP
VATLLAHHWW PTLLGALAMV VCYTLFYIST VFSLSYGVGT LHFSRPSFLG LLCLAVVFMG
LATPLSAWAS DRFGRKPVLI VGIIAAILSG FTMAPLLGSG QTPLVALFLI IELFLMGVTF
APMGALLPEL FPTNVRYTGA GVSYNLGGIL GASIAPYIAQ KLAQQGGLSW VGMYVSAAAV
VSLIGVLCMR ETRDTRLM
|
|---|
| |