Gene Rpic12D_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2730 
Symbol 
ID8020395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2883657 
End bp2885444 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content64% 
IMG OID644831511 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_002982673 
Protein GI241664313 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CACGCAAATC CAACGGCACC ACGGCGCGCG CGCGCCTGGG TCAGTTTTCC 
GCCAGCCCGG TGCTGGGCCT GCGCCTGCCC ATGTGGCGCT CGAAGCTGGT CGTGTTCTTG
ATGTTCGCAG CATTCCTGGC GCTGATCGGG CGCGCGCTGT GGATTCAAGG CCCCGGCAAC
CGCTTCTATG AGGCTGAAGG CAAGAAGCGC TTCCAGCGCA CGCTGGAATT GCCCGCCACC
CGCGGCAAGA TTCTCGATCG CAATGGTCTG GTGCTGGCCA CGAGCCTGCC GGTCAAGGCC
ATCTGGGCGG TACCCGAAGA CGTGCCCAAC AACGTGCCTG GCGAAGACAT GATGAAGCTC
GCCAAGCTGC TGGGCATGAG CAACAAGGAG CTTTCGGGCA AGCTCGGCGA AGACAAGGGT
TTCGTCTACC TCAAGCGTCA GGTGCTGCCG GAGGTGGCCG ACCAGATTGC CGCGCTGAAG
ATCGAAGGCA TCTATCAGAC GCGAGAGTAC AAGCGCTTCT ACCCGGAAGG CGAGGCGATG
GCGCACATCG TCGGTTTCAC GAATGTGGAA GACAAGGGCC AGGAAGGTAT GGAACTGGCA
CGCGAGTCCG ACCTTGCAGG TGCTGCCGGG CAGCGTCAGG TGATCAAGGA TCGGCTGGGG
CGCGTGGTGG AAGACGTGGG CGTGCTCAAG GCCCCGCGTG ACGGGCACGA CCAGACGCTC
TCGATCGACG CCAAGATCCA GTACCTGACC TTCAATGAGC TGAAGGCCGC CATCGAGCGT
ACCCACGCCA AGGCGGCCAG CGCGATCGTG CTGGATGCTC AGACGGGCGA GGTCCTGGCG
CTTGCCAACT ACCCGACCTA CAACCCGAAC GACCGCAGCC GCCTGTCGGG CGAACAACTG
CGCAACCGCG TGCTGACCGA CACCTTCGAG CCGGGCTCGA TGATGAAGCC GATCACCATC
AGCTTGGCGC TGCAGCTCAA GCGTGTGACA CCCAACACGC TGGTGCAGAC CAACGGCAAA
TACAGCTTCG AAGGCGCGAC CATTTCCGAC ACCGGCAACT ACGGCACGTT GACGGTCGCC
CAGGTCATCC AGCACTCCAG CAACATCGGC ACGACCAAGA TTGCGATGAC GCTCAAGCCA
CAGGAAATGT GGGACATGTT CACGAGCGTC GGACTGGGGC AGGCACCGAA GATCGGCTTC
CCGGGCGCGG TGGCGGGGCG GCTGCGGCCG GCCAACAAAT GGCGCCGCAT TGAACAGGCG
ACGATGTCGT ATGGATATGG CCTGTCGGTA TCGCTGTTCC AGATTGCGCA CGCCTACACC
ATCTTCGCGC ACGATGGCGA GCTGATCCCG ATCACGATGT ACCGCACCAA TGGGCAGCCG
CCCCAAGGTG AGCGGGTGAT CTCGCCGGAA GTGGCGCGGC AGGTTCGCCA GATGCTTGAG
ACCGTGACGG CGCCCGGGGG CACGGCCCCC CAGGCGCAAG TGATGGGCTA TCGCGTCGGG
GGCAAGACCG GTACGGCGTG GAAGCACACC GGACGTGGCT ATGACCGCTC CAAATATCGC
GCCTCGTTCA TTGGTCTGGC GCCGATGTCG AACCCGCGCA TCATCGTGGC GGTGAGCGTG
GACGAGCCGA CGGTGGGTAA CCGCTATGGC GGTGGCGCGG CCGGCCCGGT GTTTTCGCAG
ATCGTGGGCG GCACCCTGCG CGCGTTGAAC GTGCCGCCGG ATTCGCCGGT GCGCCAGCTT
GTGATGACGC CGGACGTGCC GGAAGAGCCC GTCGGGGGCC TGCAATGA
 
Protein sequence
MSGARKSNGT TARARLGQFS ASPVLGLRLP MWRSKLVVFL MFAAFLALIG RALWIQGPGN 
RFYEAEGKKR FQRTLELPAT RGKILDRNGL VLATSLPVKA IWAVPEDVPN NVPGEDMMKL
AKLLGMSNKE LSGKLGEDKG FVYLKRQVLP EVADQIAALK IEGIYQTREY KRFYPEGEAM
AHIVGFTNVE DKGQEGMELA RESDLAGAAG QRQVIKDRLG RVVEDVGVLK APRDGHDQTL
SIDAKIQYLT FNELKAAIER THAKAASAIV LDAQTGEVLA LANYPTYNPN DRSRLSGEQL
RNRVLTDTFE PGSMMKPITI SLALQLKRVT PNTLVQTNGK YSFEGATISD TGNYGTLTVA
QVIQHSSNIG TTKIAMTLKP QEMWDMFTSV GLGQAPKIGF PGAVAGRLRP ANKWRRIEQA
TMSYGYGLSV SLFQIAHAYT IFAHDGELIP ITMYRTNGQP PQGERVISPE VARQVRQMLE
TVTAPGGTAP QAQVMGYRVG GKTGTAWKHT GRGYDRSKYR ASFIGLAPMS NPRIIVAVSV
DEPTVGNRYG GGAAGPVFSQ IVGGTLRALN VPPDSPVRQL VMTPDVPEEP VGGLQ