Gene Rpic12D_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2727 
SymbolmraY 
ID8020392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2879498 
End bp2880667 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content62% 
IMG OID644831508 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_002982670 
Protein GI241664310 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTGG CATTGGCGCA ATGGTTGCAG AACGACTACG GCTTCCTGCG CGTCTTCAAT 
TATCTGACGT TCCGCGCCGT GATGGCATCG CTCACGGCGC TGGTGATCGG CCTCGGGTTC
GGGCCGTGGG TGATCCGTCG CCTGACCGAG CTGAAGGTCG GCCAGGCCGT GCGCAGCTAC
GGTCCGCAAA CGCATCTGGT CAAGGCCGGC ACGCCCACCA TGGGCGGCGT GCTGGTGCTC
ATCGGCATTG CCGTGTCGAC GCTGCTGTGG GCCGACTGGG GCAACCGCTT CATCTGGATC
GTGCTGCTGG TTACGCTCGG CTACGGCGCC GTCGGCTGGG TGGATGACTA CCGCAAGGTC
GTTCACCGTG ACCCGAAGGG CATGTCTTCG CGCGAGAAGT TCTTCTGGCA GACCGTGATC
GGCCTGTTTG CGGCGGCGTA TCTGGCGTTC TCGGTGTCCG AGACCAGCAA CATGCGCGTG
CTCGAGCTGT TCATGGAGTG GGTGCGCAGC GGCCTGTCGC TGAACCTGCC GGCCAAGTCG
CACCTGATCG TGCCGTTCTT CAAAGAGATC AGCTACCCGC TCGGCGTGTT CGGTTTCATC
ATCCTGACGT ACCTCGTGAT CGTCGGCTCC AGCAATGCGG TGAACCTGAC CGATGGCCTC
GATGGCCTTG TCATCATGCC GGTCGTGCTG GTGGGCAGCG CGCTGGGTGT GTTTGCCTAC
GTGATGGGTA GCGCTGTCTA CAGCAAATAC TTGCTGTTCC CGCACATTCC GGGTGCGGGT
GAGCTGCTGA TCTTCTGCTC GGCGATGGCC GGAGCGGGGC TTGCCTTCCT GTGGTTCAAC
GCGCATCCGG CGCAGGTATT CATGGGTGAT GTCGGCGCGC TGGCGCTTGG CGGCGCGCTG
GGCACCATCG CCGTGATCGT GCGTCAAGAA ATCGTGCTCT TCATCATGGG CGGCATCTTC
GTGGCGGAGA CCGTCTCGGT GATGCTGCAG GTGACGTGGT TCAAGTTCAC CAAGAAACGT
TATGGCGAGG GCCGGCGCCT GTTCCGCATG GCGCCGCTGC ATCATCATTT CGAGCTGTCC
GGCTGGAAGG AAACGCAGGT GGTCGTGCGC TTCTGGGTCA TCACCATGAT GCTGGTGCTG
ATCGGCCTGT CGACCCTGAA GCTGCGGTGA
 
Protein sequence
MLLALAQWLQ NDYGFLRVFN YLTFRAVMAS LTALVIGLGF GPWVIRRLTE LKVGQAVRSY 
GPQTHLVKAG TPTMGGVLVL IGIAVSTLLW ADWGNRFIWI VLLVTLGYGA VGWVDDYRKV
VHRDPKGMSS REKFFWQTVI GLFAAAYLAF SVSETSNMRV LELFMEWVRS GLSLNLPAKS
HLIVPFFKEI SYPLGVFGFI ILTYLVIVGS SNAVNLTDGL DGLVIMPVVL VGSALGVFAY
VMGSAVYSKY LLFPHIPGAG ELLIFCSAMA GAGLAFLWFN AHPAQVFMGD VGALALGGAL
GTIAVIVRQE IVLFIMGGIF VAETVSVMLQ VTWFKFTKKR YGEGRRLFRM APLHHHFELS
GWKETQVVVR FWVITMMLVL IGLSTLKLR