Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2717 |
Symbol | lpxC |
ID | 8020382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2867487 |
End bp | 2868404 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644831498 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_002982660 |
Protein GI | 241664300 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAC AACGCACCAT CAAGTCCCTC GTCAAGACCG TCGGCATCGG GCTGCACTCG GGCCGCAAGG TGACGTTGAC GTTGCGCCCG GCACCCGCAG GCACCGGCAT CGTGTTCACG CGTGTGGACC TCGACCCGGC CGTCGAGATT CCCGCTACCG CAAGCGCCAT TGGCGACACG CGCTTGGCGT CCGTGCTGCA AAAGGACGGC GCCCGCGTCT CGACCGTCGA ACATTTGATG TCCGCTTGCG CTGGTCTTGG CATCGACAAT CTGTATGTCG ACGTCGACGC CGAAGAAATC CCCATCATGG ACGGCAGCGC GGCCTCGTTC GTGTTTCTGC TGCAATCGGC GGGTATCGAA GAGCAGGGCG CAGCCAAGCG GTTCATTCGC GTGACGAAGC CGGTGGAAAT CCGCGAGGGC GACAAGCTTG CTCGCCTGGA CCCGTACTTT GGTTTCAAGC TGTCGTTCAC GATCGAATTT CGTCATCCCG CTGTCGACAA GACCGGCCAG ACGTTCGAGA TCGACTTTGC CGATACGAGC TACACGCGCG AAATCGCCCG CGCCCGTACG TTCGGTTTCG CCCACGAAGT CGAGATGCTG CGCGAGGTCG GCCTGGCGCG CGGCGGCAGC CTCGACAACG CCATCGTGCT CGACGAGCAC CGCATGCTGA ACAACGACGA ACTGCGCTAC GGCGATGAGT TCGTCCGTCA CAAGATCCTC GACGCGATTG GCGACCTGTA TGTGGTGGGC CACCCGCTGA TCGCTGCATA CACCGCGCAC AAGTCGGGTC ATGGCCTGAA CAACGCGCTG CTGCGCGCGC TGCTGGCCGA CGAAACGGCT TACGAGATGG TGACGTTCGA CAAGGTGGAA GAAGCGCCGC GCGCGTTCCT GCCGCAGTTG CAACCGGCCT TCTCGTGA
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Protein sequence | MLKQRTIKSL VKTVGIGLHS GRKVTLTLRP APAGTGIVFT RVDLDPAVEI PATASAIGDT RLASVLQKDG ARVSTVEHLM SACAGLGIDN LYVDVDAEEI PIMDGSAASF VFLLQSAGIE EQGAAKRFIR VTKPVEIREG DKLARLDPYF GFKLSFTIEF RHPAVDKTGQ TFEIDFADTS YTREIARART FGFAHEVEML REVGLARGGS LDNAIVLDEH RMLNNDELRY GDEFVRHKIL DAIGDLYVVG HPLIAAYTAH KSGHGLNNAL LRALLADETA YEMVTFDKVE EAPRAFLPQL QPAFS
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