| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2714 |
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| Symbol | |
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| ID | 8020379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2862829 |
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| End bp | 2865633 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644831495 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_002982657 |
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| Protein GI | 241664297 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG GCCTTCTCAA GAAGATTTTC GGCAGCCGTA ATGAACGGCT GATCAAACAG
TACCGCCGCA AGGTGGCGCA GATCAATGCG CTCGAGCCCA AGTTCGAAGC GCTCACCGAT
GCCGAGCTGC AGGCCAAGAC CGAAGAATTC CGCCAACGCT TTGCCAAGGG CGAGACGCTC
GACGCGCTCC TGCCCGAAGC GTTTGCCGTG TGCCGTGAGG CCAGCAAGCG CGTAATGAAG
ATGCGGCACT TCGACGTGCA GCTGATCGGT GGCATGGTGC TGCACGACGG CAAGATCGCC
GAAATGCGCA CGGGTGAAGG CAAGACGCTG ACGGCTACGC TTGCTGTGTA CCTGAACGCC
ATCTCTGGCC AGGGCGTGCA CGTCGTGACG GTCAACGATT ACCTGGCACA GCGCGACGCC
GAATGGATGG GCCGCCTGTA CAATTGGCTG GGCTTGTCGG TGGGGGTCAA CCTGACCACC
ATGGACCACG ACCAGAAGCA GGCCGCCTAC GCATCGGACA TCACCTACGG CACCAACAAC
GAGTTCGGCT TCGACTACCT GCGCGACAAC ATGGTGTACG ACGCCGGCCA GCGCGTGCAG
CGTCCGCTGA ACTACGCGAT CGTCGACGAG GTGGACTCCA TCCTGATCGA TGAAGCGCGT
ACCCCGCTGA TTATCTCCGG CCAGGCGGAA GACCACACCG ACCTCTACCG CCGCATGAAC
AGCATCCCGG CGCAGCTCAC GCGCCAGATC GGCGAAGAGA AGTCGGATGG CACGGGCGTC
GAGAAGCCGG GCGACTACTA TGTCGACGAA AAATCGCACC AGGTCTATCT GACTGAATCC
GGTCACGAGA AGGCCGAGCA GATCCTGCTG CAAGCCGGTT TGATCGGCGA GGGCGAATCG
CTCTACGCGC CACAGAACAT CACGCTGATG CATCACCTGT ACGCCGCCCT GCGCGCGCAC
AGCCTGTTCT TCCGCGATCA GCACTACGTC GTGCAGAACG GTGAGGTGGT GATCGTCGAT
GAATTCACCG GCCGCCTGAT GGCGGGCCGT CGCTGGTCCG ACGGTCTGCA CCAGGCCGTG
GAAGCCAAGG AAGGCGTGCA GATCCAGCAG GAAAACCAGA CGCTGGCGAC CATCACGTTC
CAGAACTACT TCCGCATGTA CAACAAGCTG TCGGGCATGA CCGGTACGGC GGACACGGAA
GCGTATGAAT TCCAGGAGAT CTACGGCCTG GAAACCGTGG TGATCCCGAC GAACCGCACG
CCGCAGCGCA AGGACTTGCA GGATCAGATC TACAAGACTT CGAAGGAGCG CTACGACGCC
GTCATTCGCG ACATTCGCGA TTGCTACGAG CGCGGCCAGC CGGTGCTGGT GGGCACGACG
TCCATCGAGA ACTCCGAACT GCTGTCGAAC CTGCTGAACC AAGGGAAGCT GCCGCATCAG
GTGCTCAACG CCAAGCAGCA CGAGCGCGAA GCCGCGATCA TTGCGGAAGC GGGCCGCCCC
AAGGCGATTA CCATTGCGAC GAACATGGCC GGCCGCGGTA CCGACATCGT GCTGGGCGGC
AACGTGGAGA AGCAAGCGGG CTTCGTGATG GCCGACGCGT CGCTCTCCGA CGAAGAAAAG
GCCGCGCGCG TGAAGCAGTT GCAGGACGAA TGGCAAGCGC TGCACGAGCA GGTGAAGGCG
GCGGGCGGTC TGCACATCAT CGGCACCGAG CGCCACGAGT CCCGCCGGAT CGACAACCAG
TTGCGCGGCC GTGCGGGCCG TCAGGGCGAC CCGGGTTCGT CGCGCTTCTA TCTGTCGCTG
GACGATCAAC TGCTGCGCAT TTTCGCGGGC GATCGCGTGC GTGCGATCAT GGATCGCCTG
AAGATGCCCG AAGGCGAGCC GATCGAAGCC GGCATCGTCA CGCGCTCGAT CGAATCGGCG
CAGCGCAAGG TCGAAGGCCG CAACTTCGAT ATCCGCAAGC AGCTGCTGCA ATACGACGAC
GTTTCCAACG ACCAGCGCAA GGAACTCTAC AAGCTGCGTA ACGAGATTCT CGAAGCGCAG
GATGTGGGCG ATCTCGTCAA GAACCTGCGT GAATCCGTGT TCACCGAGCT GTTCCGCACG
TACGTGCCGG CCGAGACCAT GGAAGAGCAG TGGGATGTTG CCGGTCTGGA AAAGACGCTG
CGTGAAGACT GGGGCGTGGA TCAGCCGCTG GTGAAGACGC TGGAAGCCGC CCAGTCGATC
GAAGACGAAG ACCTGCTCAA GATGGTGCTG GACGCCGCTG AAGCGGTGTA CGAAGGCAAG
GTGGCGCAGG TTGGCCGTGA GTCCTTCGCC GGCTTCGAGC GTTCGGTGAT GCTGCAAAGC
CTCGACACGC ACTGGCGTGA GCACCTGGCG GCGCTCGACA TGCTGCGTCA GGGTATCCAC
CTGCGCGGCT ATGCGCAGAA GGACCCGAAG CAGGAGTACA AGCGCGAGTC GTTCGAACTC
TTCGGCCGCC TGCTCGACAC CATCCGCAAC GAGGTCACGC GTATTGTCTT CACGGTGCGC
ATCCAGTCGC AGGAAGAGCT GGAGCAAGCC TCCGAACAGA TCGAAGAAGA TCTCTCCGCG
CTGAGCAACG TGCAGTACAA GCACGACGAG TTCAGCGAAC TCGCCGAAGT GGCTGCCGGC
GATGCCGAGA TTCATGGCGC AACGCCGGCC ATGGCCGCAC CGCGATCGGT GGCATCGGCT
GCTGCCGCCG CACTCGCCGG CGAAGTCCCG AAGGTTGGCC GCAACGACCC GTGCCCATGC
GGTTCGGGCA AGAAGTACAA GCAGTGCCAC GGCAAACTCG CTTGA
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| Protein sequence | MITGLLKKIF GSRNERLIKQ YRRKVAQINA LEPKFEALTD AELQAKTEEF RQRFAKGETL
DALLPEAFAV CREASKRVMK MRHFDVQLIG GMVLHDGKIA EMRTGEGKTL TATLAVYLNA
ISGQGVHVVT VNDYLAQRDA EWMGRLYNWL GLSVGVNLTT MDHDQKQAAY ASDITYGTNN
EFGFDYLRDN MVYDAGQRVQ RPLNYAIVDE VDSILIDEAR TPLIISGQAE DHTDLYRRMN
SIPAQLTRQI GEEKSDGTGV EKPGDYYVDE KSHQVYLTES GHEKAEQILL QAGLIGEGES
LYAPQNITLM HHLYAALRAH SLFFRDQHYV VQNGEVVIVD EFTGRLMAGR RWSDGLHQAV
EAKEGVQIQQ ENQTLATITF QNYFRMYNKL SGMTGTADTE AYEFQEIYGL ETVVIPTNRT
PQRKDLQDQI YKTSKERYDA VIRDIRDCYE RGQPVLVGTT SIENSELLSN LLNQGKLPHQ
VLNAKQHERE AAIIAEAGRP KAITIATNMA GRGTDIVLGG NVEKQAGFVM ADASLSDEEK
AARVKQLQDE WQALHEQVKA AGGLHIIGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL
DDQLLRIFAG DRVRAIMDRL KMPEGEPIEA GIVTRSIESA QRKVEGRNFD IRKQLLQYDD
VSNDQRKELY KLRNEILEAQ DVGDLVKNLR ESVFTELFRT YVPAETMEEQ WDVAGLEKTL
REDWGVDQPL VKTLEAAQSI EDEDLLKMVL DAAEAVYEGK VAQVGRESFA GFERSVMLQS
LDTHWREHLA ALDMLRQGIH LRGYAQKDPK QEYKRESFEL FGRLLDTIRN EVTRIVFTVR
IQSQEELEQA SEQIEEDLSA LSNVQYKHDE FSELAEVAAG DAEIHGATPA MAAPRSVASA
AAAALAGEVP KVGRNDPCPC GSGKKYKQCH GKLA
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