Gene Rpic12D_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2709 
Symbol 
ID8020374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2859223 
End bp2859981 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content61% 
IMG OID644831490 
Producthypothetical protein 
Protein accessionYP_002982652 
Protein GI241664292 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCTGT ACGAATATCC CTTCAACGAA CGCATTCGGA CGCTGCTGCG CCTCGAAGAC 
CTGTTCGAGC GGCTGGATTT CTTTCTCGTG CAGGAGCACC CGCTGCAACA CCACGTGGCA
CTGACCACGC TGTTCGAAGT GGTCGACGTG GCCGGGCGTG CCGATCTCAA ATCCGATCTG
CTGAAAGAAC TCGATCGCCA GCGCCAGACG CTCACCGCGC TGCGCGCCAA CCCGCAGATC
GATCAAGACG CGCTCGACGC CGTCATCAGC GAACTGGAAA CCGCCTCGGG CAATCTCACC
GCCACACATG GCAAGGCCGG CCAGCTGATT GCCGACAACG AGTGGCTGAC GAGCATCCGC
AGCCGCGCCA TCATTCCCGG TGGTACATGT GAATTCGATC TGCCGGCGTA TTTTGCATGG
CAGCATCACC CCGCCGAGCG CCGCCGCGCC GACATCATCA AATGGGCCCA ACCGCTGGTG
CCGCTGCGCG ACGCCACGAT GATCGTGCTG CGCCTGCTGC GCGAATCGGG CCAGAGTGGC
AAGGTGATTG CTAACGCTGG AAGCTATCAG CAGATGCTGT CGGGCCGCGT GTATCAGCTG
ATGCAGGTGC GCCTGGATGA GTCGGCGCTG GGGTTCATTC CCGAAATCAG CGCCAACAAA
TACATGCTCT GGGTGCGTTT TACCCAGCAG GATGGCGACC TGCGACCCAA GCCGGTCGAT
GCGGATATCC CGTTCCAGCT GAAGCTCTGT AATTTCTGA
 
Protein sequence
MILYEYPFNE RIRTLLRLED LFERLDFFLV QEHPLQHHVA LTTLFEVVDV AGRADLKSDL 
LKELDRQRQT LTALRANPQI DQDALDAVIS ELETASGNLT ATHGKAGQLI ADNEWLTSIR
SRAIIPGGTC EFDLPAYFAW QHHPAERRRA DIIKWAQPLV PLRDATMIVL RLLRESGQSG
KVIANAGSYQ QMLSGRVYQL MQVRLDESAL GFIPEISANK YMLWVRFTQQ DGDLRPKPVD
ADIPFQLKLC NF