Gene Rpic12D_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2654 
Symbol 
ID8020318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2798149 
End bp2799273 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID644831434 
Productgamma-glutamyl kinase 
Protein accessionYP_002982597 
Protein GI241664237 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00506525 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC ATTCGCTGAT CGCCGATGCG CGCCGCCTTG TCGTCAAGGT CGGTTCCAGC 
CTGGTTACCA ACGACGGCCG TGGCCTCGAC CAGGCCGCCA TTGCCCGCTG GGCTGCGCAG
ATCGCGGCGC TACGGGCGGC GGGCAAGGAA GTTGTGCTGG TCAGCTCCGG TGCCATCGCC
GAGGGCATGC AGCGCTTGGG CTGGGCCAAG CGTCCGAAAG AAATTCATGA GTTGCAGGCC
GCCGCCGCCG TCGGGCAGAT GGGGCTGGCA CAGGTGTACG AATCCGAGTT CGCGCGACAC
GGCATCCGCA CGGCGCAGGT GCTGCTCACG CATGGCGACC TGGCTGATCG CGAGCGCTAT
CTCAATGCAC GTTCCACACT GCTCACGCTG CTGAGCCTCG GTGTCGTGCC GATCATCAAC
GAGAACGACA CCGTCGTCAC CGATGAAATC AAGTTCGGCG ACAACGACAC GCTGGGAGCA
CTCGTCACCA ACCTGATCGA GGGCGACGCG CTGATCATCC TGACGGACCA ACGTGGCCTG
TACACCGCCG ACCCGCGCAA GGAGCCGGGC GCCCGCTTTG TCGACGAGGC GCAAGCCGGC
ACGCCGGACC TTGAGCAGAT GGCCGGCGGT GCCGGTTCGA GCATCGGCAA GGGCGGCATG
CTGACGAAGA TTCTGGCGGC CAAGCGTGCT GCAAAATCGG GCGCGCACAC CATCATCGCG
TCGGGTCGCG AGGCTGACGT GCTCGCGCGG CTGGCAAGCG GCGAGGCCAT CGGCACCCAG
CTCCGCGCCC CCACCGGGCG AATGGCGGCG CGCAAGCAGT GGATGATCGA CCACCTGCAG
TTGCGCGGTC GCGTGGTGCT TGACGCCGGC GCGGTCGAGA AGCTCACGGC CGGCGGGAAG
TCGTTGCTGC CGATCGGCGT GACGGAAGTG CAAGGCGAAT TTGCGCGCGG CGAAGTGATT
TCCTGCGTGG ACGCGGCGGG CCGCGAGGTG GCGCGTGGTC TGACGAACTA TTCCTCCGCC
GAGGCCCGGC TGATCGCGCG CAAGGCATCG TCCGAGATTG AGGCGGTGCT GGGCTACGTC
AGCGCTGCCG AGCTGGTGCA TCGGGATAAC CTGGTGCTGC TCTGA
 
Protein sequence
MALHSLIADA RRLVVKVGSS LVTNDGRGLD QAAIARWAAQ IAALRAAGKE VVLVSSGAIA 
EGMQRLGWAK RPKEIHELQA AAAVGQMGLA QVYESEFARH GIRTAQVLLT HGDLADRERY
LNARSTLLTL LSLGVVPIIN ENDTVVTDEI KFGDNDTLGA LVTNLIEGDA LIILTDQRGL
YTADPRKEPG ARFVDEAQAG TPDLEQMAGG AGSSIGKGGM LTKILAAKRA AKSGAHTIIA
SGREADVLAR LASGEAIGTQ LRAPTGRMAA RKQWMIDHLQ LRGRVVLDAG AVEKLTAGGK
SLLPIGVTEV QGEFARGEVI SCVDAAGREV ARGLTNYSSA EARLIARKAS SEIEAVLGYV
SAAELVHRDN LVLL