| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2651 |
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| Symbol | |
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| ID | 8020315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2794764 |
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| End bp | 2796488 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644831431 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_002982594 |
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| Protein GI | 241664234 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.40844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGT CCCAATTCTT CATTTCCACG CTCAAGGAAG CGCCCGCTGA CGCGGAGATC
GTCTCGCACA AGTTGATGAT GCGTGCCGGC ATGATCAAGA AGCTTGGCGC GGGCCTCTAT
ACGTATATGC CCGTGGGTTT GCGCGTCATC CGCAAGGTCG AGCAGATCGT GCGTGAGGAA
ATGAATGCCG CCGGCGCGGT GGAAGTGCTG ATGCCGGTGG TGCAGCCGGG CGAGCTGTGG
CAGGAGACCG GCCGCTGGGA CAAGATGGGC GACGAACTGC TGCGCTTCAA GGATCGCCAC
GAGCGCGACT TCGTCATGCA GCCGACGTCG GAGGAGGTGG TGACCGACAT CGCTCGCACC
GAAATCCGCT CGTACAAGCA GCTGCCGGTC AATTTCTACC AGATCCAGAC CAAGTTCCGG
GACGAGCGCC GGCCGCGTTT CGGCATCATG CGCGGCCGCG AGTTCACGAT GAAGGATGCG
TACTCCTTTG ATCGCGACGC CGAAGGCCTG AAGCTGTCGT ACCAGAAAAT GTACGACGCC
TACACGCGCA TCTTCCAGCG TTTCGGCCTG GAATTCCGCG CCGTGGCGGC TGATAACGGC
GCTATCGGCG GCTCGGGCTC GCACGAGTTC CACGTGATTG CCGATACGGG CGAAGACGCC
ATCATCTACT GCCCGGATTC GGACTACGCC GCCAACATCG AGGCTGCGGA AGCCGTTGCC
CCGGCCGCGC CGCGTGGCGC TGCCACCGAG GCCCTCACCA AGACGCATAC ACCCGGCCGC
TCCAAGTGCG AGGCTGTGGC CGAGCAACTG GGTATTCCGC TGCAGCGCAC GATCAAATCC
ATCGTGCTGG CCACCGAAGT CGAGGGCGGC GAGCCCCAGA TCTGGTTGCT GCTGCTGCGC
GGCGACCATG AACTCAACGA GGTCAAGGCA TCGAAGGTGC CGGGTCTGGC CGACTTCCGC
TTCGCAACCG AGGGCGAAAT CCTCCGCGCA TTCGGCACGC GCCCTGGCTA TCTCGGCCCG
ATCGGCACGA AGCTGCCCGT GAAGGTGGTG GCAGACCGCA CGGCGGCCGC CATGAGCGAT
TTCGTGGTCG GCGCCAACGA AGAGGATTAC CACTTCACCG GCGTGAACTG GGGCCGCGAC
TTGCCCGAGC CCGAGGTCTA CGACCTGCGC AACGTGGTGG CCGGCGACCC CTCGCCGGAT
GGCAAGGGCA CGCTGGCCGT TTGCCGCGGG ATCGAAGTCG GTCACGTCTT CATGCTGGGC
ACGCGCTACT CCGAGGCGAT GAACGCGACG TTCCTCGACG AGAACGGCAA GACGCAGCCG
ATGGTGATGG GCTGCTACGG CATCGGCATC ACGCGGATTC TGGGTGCGGC CATCGAGCAG
AACTACGATG CGCGCGGGAT TATCTGGCCG GCATCGATCG CGCCGTTCCA GGTGGTGATC
TGCCCCGTGG GTTACGACCG CTCCAACGCC GTGCGCGAAG AAGCCGATCG CCTGCACGCC
GAGTTGGTTG CCGCCGGCAT CGACGTGATG CTGGACGACC GCGGCGAGCG CCCCGGGGCG
ATGTTTGCCG ACTGGGAGCT GATCGGCGTG CCGTTCCGCG TCGTGGTGGG CGACCGCGGC
CTCAAGGAAG GCAAGCTGGA ATTTCAAGGC CGCCGCGACG AAGCCGCCAC CGCTGTGGCC
CCGGCCGATG TGTTGGCCAC GCTGAAGGCG CGTCTCGCGC AATAA
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| Protein sequence | MKASQFFIST LKEAPADAEI VSHKLMMRAG MIKKLGAGLY TYMPVGLRVI RKVEQIVREE
MNAAGAVEVL MPVVQPGELW QETGRWDKMG DELLRFKDRH ERDFVMQPTS EEVVTDIART
EIRSYKQLPV NFYQIQTKFR DERRPRFGIM RGREFTMKDA YSFDRDAEGL KLSYQKMYDA
YTRIFQRFGL EFRAVAADNG AIGGSGSHEF HVIADTGEDA IIYCPDSDYA ANIEAAEAVA
PAAPRGAATE ALTKTHTPGR SKCEAVAEQL GIPLQRTIKS IVLATEVEGG EPQIWLLLLR
GDHELNEVKA SKVPGLADFR FATEGEILRA FGTRPGYLGP IGTKLPVKVV ADRTAAAMSD
FVVGANEEDY HFTGVNWGRD LPEPEVYDLR NVVAGDPSPD GKGTLAVCRG IEVGHVFMLG
TRYSEAMNAT FLDENGKTQP MVMGCYGIGI TRILGAAIEQ NYDARGIIWP ASIAPFQVVI
CPVGYDRSNA VREEADRLHA ELVAAGIDVM LDDRGERPGA MFADWELIGV PFRVVVGDRG
LKEGKLEFQG RRDEAATAVA PADVLATLKA RLAQ
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