Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2638 |
Symbol | |
ID | 8020302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2780125 |
End bp | 2782155 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644831418 |
Product | hypothetical protein |
Protein accession | YP_002982581 |
Protein GI | 241664221 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.828392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTGGA ATCACCCCGC CCGGCGCCTG CTGAGGGCCG CGCTGAGCAC GACCGTGGCA GCGACGCTGG CGACCACATT GACCGCATGC GGCGGGGGCG ACAGCGGCCC CGTCGCCAAC CAGGGCAGCA CGGACGCGCC CTCCGCCAGC GCCAGCAAGA AGGTGCTGAT GGTCGGCGTG GACGGCGCCA CCTATGCGCA GGTACAGAGT GCGCTCTTGC AGCACAGCCT GCCGAACCTG GGCGCGCTGG CGGTGATGCC GGCATCGACC GGCGGCACGC TCGGCACCAC CACCGCCCAG CCACCGCTGG ACACACCCAG CTGGGCCACC GTGCTGACCG GCGCCTGGCA AAACCGCCAC GGCGTGACCG ACGACACCGT CACCACCCTG GCCGCCCCAA GCGTGTTCAG CTACGCGCGC AGCGCCGCCA AGGCTGCCGG CACCACGCAA CGGCTGGGCG CCGCCGTCAG CTCGGCCGCG CTGCCGGCGC TGCTCAAGGC GGATCAGCAA GCCGGCAATC TCGACACGCT GGTCGACTGC GCCCAGGTGG ACACCTGCGT GACGCAGAAC AGCGTGAAGC TCGTGCAGTC CGGCTACGAC GTCGTCTTCG CGCAATACAC CGCGCCGGCC GCCGCCGCGC TGGCCTCGGG CCTGCAAAGC GATGCGTACA CCGCTGCGCT GGCCAACGTC GACCAGGCGC TCGGCACGCT GCAGGCCGCC ATCGCCCGGC GCCGCACCGC CAACCCGAAC GAAGACTGGC TTGTCGTCGT CACCACCAGC CACGGGCTGG ACGGCACAGG CGCCACCACG TCGGCGCCGA CGCTGGAAAA CCGCACCGCC TTCATCGCCC TGAACAAGCC GGTCAACGGC GTGCTCGGCA AGACCGGCAT GGCGGCGCCC ACGTCGGAAG CCACGCTGGC CGCGCTGCCG AGCGAGGCCG ACATCGTGCC GACCGTCCTG GCGCAACTGA ACGCCGCCGT ACCGGCTACG GCGCATCAGC TCGACGGTGC AGCGCTCACG GCCAGTGCCG TCGGCGTGCG CAACATCCAG AGCACGGTCG GCGCGTACAA CGCCTCGCTG GTGCTGAACT GGCAGAACCC GACCCCAGCC AGCGGCCCGA TCACCGTGCT GCGCGACGGC AAGCCGGTCG CCACGCTGCC CGCCACGGCC ACGCAGTACA CCGACAGCAA CATCGCTGCC GCCAGCGGCA TTTACCGCAT CAACTACACG CTGGTGCGCA ACAACGTGCC GGTGTCGATG CTTGCGCAGA TCGCCTACGT TGTGCCGACG CCGCTGGCCA CCTCGCTCAC CACCGGCCTG GCGGCGTATT ACAGCTTCGA TCCACTGCCC CCGACCGACC GTAAAGCGAA TTCGACGATC GGCCCGTGGG TGGCCGGCAC CGACGGCGGC TCTGCTGCGG CCGACCCGTT TGGCGGCACG GCCCTGTCGG TCGATTCGCG CATCGACGCC TACAAGCTCA CGCAGAACGG CGCAGACATC GCACTGAGCC CGCAATTCAC CATCGGTTTC TGGTTCAGGT CGGATTGCAC ACAGGGCAAC GGCACCGGCG AGCCCATCCT CGCCAATAAG GACTACTACT CCGGCGCCAA TGCGGGCATC GCCATCGGAT TGTGGGGCGG CTGCGAAGTG CGCTTCAACC TCGGCAGCGG CGGCAAGCGC GACGACATCC AGGGCATGAA GTTCAGCGCC AACCAGTGGG CGTATCTCGC CCTCTCGGTC GACACGCAGG CCAAGCGCTT CAGCGCCTAC ATCCTCGATC CGGTACTGGG CGTGCAGAAG GTGGAAGACA AGGCCATCGC CAATACCGAC GTCACCAAGC TGGGCGGCCT GGCCACCAAG GTCTGGGGCC TGAACGACGA CGCCACGCAC AACTACGTGC CCAACAACCC GGGCTCGCTC AAGGGCGTGA TGGCCTACGA CGACCTCGCC ATGTGGACGC GCCGGCTGAC GCTGGATGAA CTCAAGACGA TCAACGGCTC GCACCAGCCG CTGTCGTCGC TGAACCCCTG A
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Protein sequence | MAWNHPARRL LRAALSTTVA ATLATTLTAC GGGDSGPVAN QGSTDAPSAS ASKKVLMVGV DGATYAQVQS ALLQHSLPNL GALAVMPAST GGTLGTTTAQ PPLDTPSWAT VLTGAWQNRH GVTDDTVTTL AAPSVFSYAR SAAKAAGTTQ RLGAAVSSAA LPALLKADQQ AGNLDTLVDC AQVDTCVTQN SVKLVQSGYD VVFAQYTAPA AAALASGLQS DAYTAALANV DQALGTLQAA IARRRTANPN EDWLVVVTTS HGLDGTGATT SAPTLENRTA FIALNKPVNG VLGKTGMAAP TSEATLAALP SEADIVPTVL AQLNAAVPAT AHQLDGAALT ASAVGVRNIQ STVGAYNASL VLNWQNPTPA SGPITVLRDG KPVATLPATA TQYTDSNIAA ASGIYRINYT LVRNNVPVSM LAQIAYVVPT PLATSLTTGL AAYYSFDPLP PTDRKANSTI GPWVAGTDGG SAAADPFGGT ALSVDSRIDA YKLTQNGADI ALSPQFTIGF WFRSDCTQGN GTGEPILANK DYYSGANAGI AIGLWGGCEV RFNLGSGGKR DDIQGMKFSA NQWAYLALSV DTQAKRFSAY ILDPVLGVQK VEDKAIANTD VTKLGGLATK VWGLNDDATH NYVPNNPGSL KGVMAYDDLA MWTRRLTLDE LKTINGSHQP LSSLNP
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