Gene Rpic12D_2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2638 
Symbol 
ID8020302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2780125 
End bp2782155 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content69% 
IMG OID644831418 
Producthypothetical protein 
Protein accessionYP_002982581 
Protein GI241664221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.828392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTGGA ATCACCCCGC CCGGCGCCTG CTGAGGGCCG CGCTGAGCAC GACCGTGGCA 
GCGACGCTGG CGACCACATT GACCGCATGC GGCGGGGGCG ACAGCGGCCC CGTCGCCAAC
CAGGGCAGCA CGGACGCGCC CTCCGCCAGC GCCAGCAAGA AGGTGCTGAT GGTCGGCGTG
GACGGCGCCA CCTATGCGCA GGTACAGAGT GCGCTCTTGC AGCACAGCCT GCCGAACCTG
GGCGCGCTGG CGGTGATGCC GGCATCGACC GGCGGCACGC TCGGCACCAC CACCGCCCAG
CCACCGCTGG ACACACCCAG CTGGGCCACC GTGCTGACCG GCGCCTGGCA AAACCGCCAC
GGCGTGACCG ACGACACCGT CACCACCCTG GCCGCCCCAA GCGTGTTCAG CTACGCGCGC
AGCGCCGCCA AGGCTGCCGG CACCACGCAA CGGCTGGGCG CCGCCGTCAG CTCGGCCGCG
CTGCCGGCGC TGCTCAAGGC GGATCAGCAA GCCGGCAATC TCGACACGCT GGTCGACTGC
GCCCAGGTGG ACACCTGCGT GACGCAGAAC AGCGTGAAGC TCGTGCAGTC CGGCTACGAC
GTCGTCTTCG CGCAATACAC CGCGCCGGCC GCCGCCGCGC TGGCCTCGGG CCTGCAAAGC
GATGCGTACA CCGCTGCGCT GGCCAACGTC GACCAGGCGC TCGGCACGCT GCAGGCCGCC
ATCGCCCGGC GCCGCACCGC CAACCCGAAC GAAGACTGGC TTGTCGTCGT CACCACCAGC
CACGGGCTGG ACGGCACAGG CGCCACCACG TCGGCGCCGA CGCTGGAAAA CCGCACCGCC
TTCATCGCCC TGAACAAGCC GGTCAACGGC GTGCTCGGCA AGACCGGCAT GGCGGCGCCC
ACGTCGGAAG CCACGCTGGC CGCGCTGCCG AGCGAGGCCG ACATCGTGCC GACCGTCCTG
GCGCAACTGA ACGCCGCCGT ACCGGCTACG GCGCATCAGC TCGACGGTGC AGCGCTCACG
GCCAGTGCCG TCGGCGTGCG CAACATCCAG AGCACGGTCG GCGCGTACAA CGCCTCGCTG
GTGCTGAACT GGCAGAACCC GACCCCAGCC AGCGGCCCGA TCACCGTGCT GCGCGACGGC
AAGCCGGTCG CCACGCTGCC CGCCACGGCC ACGCAGTACA CCGACAGCAA CATCGCTGCC
GCCAGCGGCA TTTACCGCAT CAACTACACG CTGGTGCGCA ACAACGTGCC GGTGTCGATG
CTTGCGCAGA TCGCCTACGT TGTGCCGACG CCGCTGGCCA CCTCGCTCAC CACCGGCCTG
GCGGCGTATT ACAGCTTCGA TCCACTGCCC CCGACCGACC GTAAAGCGAA TTCGACGATC
GGCCCGTGGG TGGCCGGCAC CGACGGCGGC TCTGCTGCGG CCGACCCGTT TGGCGGCACG
GCCCTGTCGG TCGATTCGCG CATCGACGCC TACAAGCTCA CGCAGAACGG CGCAGACATC
GCACTGAGCC CGCAATTCAC CATCGGTTTC TGGTTCAGGT CGGATTGCAC ACAGGGCAAC
GGCACCGGCG AGCCCATCCT CGCCAATAAG GACTACTACT CCGGCGCCAA TGCGGGCATC
GCCATCGGAT TGTGGGGCGG CTGCGAAGTG CGCTTCAACC TCGGCAGCGG CGGCAAGCGC
GACGACATCC AGGGCATGAA GTTCAGCGCC AACCAGTGGG CGTATCTCGC CCTCTCGGTC
GACACGCAGG CCAAGCGCTT CAGCGCCTAC ATCCTCGATC CGGTACTGGG CGTGCAGAAG
GTGGAAGACA AGGCCATCGC CAATACCGAC GTCACCAAGC TGGGCGGCCT GGCCACCAAG
GTCTGGGGCC TGAACGACGA CGCCACGCAC AACTACGTGC CCAACAACCC GGGCTCGCTC
AAGGGCGTGA TGGCCTACGA CGACCTCGCC ATGTGGACGC GCCGGCTGAC GCTGGATGAA
CTCAAGACGA TCAACGGCTC GCACCAGCCG CTGTCGTCGC TGAACCCCTG A
 
Protein sequence
MAWNHPARRL LRAALSTTVA ATLATTLTAC GGGDSGPVAN QGSTDAPSAS ASKKVLMVGV 
DGATYAQVQS ALLQHSLPNL GALAVMPAST GGTLGTTTAQ PPLDTPSWAT VLTGAWQNRH
GVTDDTVTTL AAPSVFSYAR SAAKAAGTTQ RLGAAVSSAA LPALLKADQQ AGNLDTLVDC
AQVDTCVTQN SVKLVQSGYD VVFAQYTAPA AAALASGLQS DAYTAALANV DQALGTLQAA
IARRRTANPN EDWLVVVTTS HGLDGTGATT SAPTLENRTA FIALNKPVNG VLGKTGMAAP
TSEATLAALP SEADIVPTVL AQLNAAVPAT AHQLDGAALT ASAVGVRNIQ STVGAYNASL
VLNWQNPTPA SGPITVLRDG KPVATLPATA TQYTDSNIAA ASGIYRINYT LVRNNVPVSM
LAQIAYVVPT PLATSLTTGL AAYYSFDPLP PTDRKANSTI GPWVAGTDGG SAAADPFGGT
ALSVDSRIDA YKLTQNGADI ALSPQFTIGF WFRSDCTQGN GTGEPILANK DYYSGANAGI
AIGLWGGCEV RFNLGSGGKR DDIQGMKFSA NQWAYLALSV DTQAKRFSAY ILDPVLGVQK
VEDKAIANTD VTKLGGLATK VWGLNDDATH NYVPNNPGSL KGVMAYDDLA MWTRRLTLDE
LKTINGSHQP LSSLNP