Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2629 |
Symbol | |
ID | 8020293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2767073 |
End bp | 2767882 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644831409 |
Product | putative hemagglutinin-related transmembrane protein |
Protein accession | YP_002982572 |
Protein GI | 241664212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.819782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATC GAGCGTTCTT GTCGAAATCG AATCCGCCAA AGCGCGGAGT ATTCCTGCGG TGCGTGCTGG CGACGGCATC GTTCGCCATG GTGGCCGGTT GCGCGAATTC GGGCAGCGGC GACATGGGAG CGTCGCTTGG CGGCGGCGGC AATTCGCAAT CCAAGCCGGC GATCACTGCA TCGACATCGC CCACGTGGTC GAACAACAAC GGCAGCAATG CGACGGGTGG CACCGGGTCG ACCGGCAGCA CGCCCATCGC GACGCTGACC GGCCCTGTCG AGCAGGTGAC GACCACCACC ATCACCGCCA TCGTGCCGCT CACCAGCACG CTGACTTCCG CCACGCAAAC GCTGGGCGCT GCCACTGGGC TGGGCGCACC TGTGAGCAAC GTGCTGGCGA CGCTGGGCGG CGCGCTTGGC AGCGAGGGCC GCACGATTTC GACGGCCGGC AAGGGTGACG GGCTGGTGTC GACGTTGGGC AACACGGTGG GTGCGCTCGG TTCGCTCACC ACCGGGTTGT CGACGGTGGT CTCGCCGACG GCGCCGTCTG CAGCAGGCAG TGCGTCGGGT GGTGCGCCGG GTAGTGCGCT GACCGGCGCC CTCGGTGGTG TGCTTGCGCC GGTCACGACG GCAGTCGGTT CGCTGACTGC GGGATTGCCG GGTGCTGGCG CGCTCGGCTC GGTTGGCGCG GTCAGCAGCG GCGGTACGGC TGCGACGGGT CCACTGGGCG GATTGGGCGG CGTCGGCACG ACGGTTGGCG GGTTGGTTGG CGGTGTGCTG TCGGGTGTGG CATCCGGCGC GCATCACTAG
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Protein sequence | MRDRAFLSKS NPPKRGVFLR CVLATASFAM VAGCANSGSG DMGASLGGGG NSQSKPAITA STSPTWSNNN GSNATGGTGS TGSTPIATLT GPVEQVTTTT ITAIVPLTST LTSATQTLGA ATGLGAPVSN VLATLGGALG SEGRTISTAG KGDGLVSTLG NTVGALGSLT TGLSTVVSPT APSAAGSASG GAPGSALTGA LGGVLAPVTT AVGSLTAGLP GAGALGSVGA VSSGGTAATG PLGGLGGVGT TVGGLVGGVL SGVASGAHH
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