Gene Rpic12D_2629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2629 
Symbol 
ID8020293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2767073 
End bp2767882 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID644831409 
Productputative hemagglutinin-related transmembrane protein 
Protein accessionYP_002982572 
Protein GI241664212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.819782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC GAGCGTTCTT GTCGAAATCG AATCCGCCAA AGCGCGGAGT ATTCCTGCGG 
TGCGTGCTGG CGACGGCATC GTTCGCCATG GTGGCCGGTT GCGCGAATTC GGGCAGCGGC
GACATGGGAG CGTCGCTTGG CGGCGGCGGC AATTCGCAAT CCAAGCCGGC GATCACTGCA
TCGACATCGC CCACGTGGTC GAACAACAAC GGCAGCAATG CGACGGGTGG CACCGGGTCG
ACCGGCAGCA CGCCCATCGC GACGCTGACC GGCCCTGTCG AGCAGGTGAC GACCACCACC
ATCACCGCCA TCGTGCCGCT CACCAGCACG CTGACTTCCG CCACGCAAAC GCTGGGCGCT
GCCACTGGGC TGGGCGCACC TGTGAGCAAC GTGCTGGCGA CGCTGGGCGG CGCGCTTGGC
AGCGAGGGCC GCACGATTTC GACGGCCGGC AAGGGTGACG GGCTGGTGTC GACGTTGGGC
AACACGGTGG GTGCGCTCGG TTCGCTCACC ACCGGGTTGT CGACGGTGGT CTCGCCGACG
GCGCCGTCTG CAGCAGGCAG TGCGTCGGGT GGTGCGCCGG GTAGTGCGCT GACCGGCGCC
CTCGGTGGTG TGCTTGCGCC GGTCACGACG GCAGTCGGTT CGCTGACTGC GGGATTGCCG
GGTGCTGGCG CGCTCGGCTC GGTTGGCGCG GTCAGCAGCG GCGGTACGGC TGCGACGGGT
CCACTGGGCG GATTGGGCGG CGTCGGCACG ACGGTTGGCG GGTTGGTTGG CGGTGTGCTG
TCGGGTGTGG CATCCGGCGC GCATCACTAG
 
Protein sequence
MRDRAFLSKS NPPKRGVFLR CVLATASFAM VAGCANSGSG DMGASLGGGG NSQSKPAITA 
STSPTWSNNN GSNATGGTGS TGSTPIATLT GPVEQVTTTT ITAIVPLTST LTSATQTLGA
ATGLGAPVSN VLATLGGALG SEGRTISTAG KGDGLVSTLG NTVGALGSLT TGLSTVVSPT
APSAAGSASG GAPGSALTGA LGGVLAPVTT AVGSLTAGLP GAGALGSVGA VSSGGTAATG
PLGGLGGVGT TVGGLVGGVL SGVASGAHH