Gene Rpic12D_2610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2610 
SymbolmtgA 
ID8020274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2748355 
End bp2749059 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content62% 
IMG OID644831390 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_002982553 
Protein GI241664193 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTT GGTTCGGCTA CGTGATCGGC TGCTTCGTTG CGGGCGTGGT CGCACTCAAC 
CTGTACTTCT TTGCTGCCAT CGCGAGTTGG CAGGTCTTCG ATCCGTCGTC TACGAGTTTC
ATGCGCGCTG AGCGTATGCG CTTGTGCGGC GCCAATGTTT TCACCTGCAA TGTCGACCGC
CGCTGGGTCA ATTACGATCA GATCTCGCGC AACCTCAAGC GTGCGGTCAT CGCCAGTGAA
GACGCGGATT TCGTCTCGCA CAGCGGCTGG GAAGTCGATG CCATGCTCGA CGCGTGGGAG
AAGAACAAGC GACGCGGCCA CGTGGTCGCG GGTGGTTCGA CCATCACGCA GCAACTCGCC
AAAAACCTGT TCCTCTCGGG CGAGCGCCAC TACGTGCGCA AGGGCGAAGA ACTCGTCATC
ACCTGGATGC TTGAGTTCTG GCTCGACAAG GAGCGCATTC TCGAGATCTA TCTGAACTCG
GTGGAATGGG GCGAGGGTGT GTTCGGCGCG GAAGCGGCGG CGCAGCATTA CTTCAAGCGC
CCGGCCTCGC AACTGACCGT GGGGCAAGCG GCGCGCCTGG CGGCGGCGCT GCCCGCGCCG
AAGTGCTTCG ACAAGAAGAG CTATTGCGCC AACGTGCACG TCAACTTCAC GCGCAAGGCC
ACCGTGATCG CCAACCGCAT GGGCTCGGCC ACGCTGCCGG ATTGA
 
Protein sequence
MMRWFGYVIG CFVAGVVALN LYFFAAIASW QVFDPSSTSF MRAERMRLCG ANVFTCNVDR 
RWVNYDQISR NLKRAVIASE DADFVSHSGW EVDAMLDAWE KNKRRGHVVA GGSTITQQLA
KNLFLSGERH YVRKGEELVI TWMLEFWLDK ERILEIYLNS VEWGEGVFGA EAAAQHYFKR
PASQLTVGQA ARLAAALPAP KCFDKKSYCA NVHVNFTRKA TVIANRMGSA TLPD