Gene Rpic12D_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2592 
Symbol 
ID8020256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2729706 
End bp2730455 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID644831372 
Productprotein of unknown function DUF558 
Protein accessionYP_002982535 
Protein GI241664175 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTTC CCCGTTTTTT CGTCGATACG CCGCTCGCTC CCAACACCAC TGTCACACTG 
CCCGAGGCTG TCACGCGCCA CATCCACGTG CTGCGCTTGG CCGTTGGCGA TGACGTCTGC
CTGTTCGATG GCTCGGGCCA CGAATTCCGC GCGCGGCTCG ATGCCATCAA CAAGCGCGAT
GCCACTGCCA GCCTTGCCGA CGCCACGCAG CCCGACACCG AAGCGCGCTA CGCCATCACG
TTGGCACAAG GCATTGCCGG TGGCGACAAG ATGGATTGGT TGATCGAGAA GGCCGTCGAG
CTGGGCGTGC ATGCCGTCAC CCCGCTACAG ACCGAACGCG CCGTGGTGCG CCTCTCTGGC
GAGCGCGCCG CCAAGCGCGT GCAGCACTGG CAGGCACTGG TGCAAGCCGC CTGCGAGCAA
TGCGGCCGCG CCCGCGTGCC GGCGGTCGCA CCGGTGAGCA CGCTGCGCGA ATGGCTTGCC
GCCGCCCGAT CCACCGACGC GCCGCGCGTG TTGCTGTCGC CGCGTGGCAC GCAATCGCTT
ACGCAGTGGG CGGTGCAGTC GCGCACGCGC ATCGAAGGCA GCGGCATCGT CCTGCTGATC
GGCCCCGAAG GCGGTCTTTC GCCCGACGAA GAAGCGCTTG CCGAATCTGC GGGTTTCTTA
CCACTGACAC TCGGGCGACG TATTCTGAGA ACGGAATCGG CGGCGCTTGT GGCCGTCTCC
GCGCTGCATG CCGTGCTCGG CGAGTTCTAA
 
Protein sequence
MGLPRFFVDT PLAPNTTVTL PEAVTRHIHV LRLAVGDDVC LFDGSGHEFR ARLDAINKRD 
ATASLADATQ PDTEARYAIT LAQGIAGGDK MDWLIEKAVE LGVHAVTPLQ TERAVVRLSG
ERAAKRVQHW QALVQAACEQ CGRARVPAVA PVSTLREWLA AARSTDAPRV LLSPRGTQSL
TQWAVQSRTR IEGSGIVLLI GPEGGLSPDE EALAESAGFL PLTLGRRILR TESAALVAVS
ALHAVLGEF