Gene Rpic12D_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2587 
Symbol 
ID8020251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2724711 
End bp2725715 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID644831367 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002982530 
Protein GI241664170 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC AACGACGCGG AACATTCAAG GCCATTGCGG CCGCCACGCT CTTCGCCATG 
GCCGGCGGCC TTACAGTGTT TGCCCATGCA GCCGATGACG TGAAGATCGG TTTCCTGGTC
AAGCAGCCCG AAGAGCCGTG GTTCCAGGAC GAATGGAAGT TCGCAGACCA GGCCGCCAAG
GAGAAGGGCT TCAAGCTGGT GAAGATCGGC GTGCCCAGCG GCGGCGAAGT GCTGACGGCC
ATCGACAACC TGGGCGCGCA GCACGCGCAG GGTTTCGTGA TCTGCGTGCC CGACGTGAAG
CTCGGACCTG CAGTCGTGGC CAAGGCCAAG CAGAACAACC TCAAGCTGAT GACGGTGGAT
GACCGTTTGG TGGATGGCGG CGGCAAGCCC ATCGAAGCCG TGCCGCACAT GGGCATCTCG
GCCACGAAGA TCGGCGAGCA GGTGGGCGAT GCCATCGCGC AAGAGATGAA GAAGCGCGGC
TGGAACCTGT CGGAGGTCGG CGCCATCCGC ATCGCCTACG ACCAGCTGCC GACCGCCAAG
GAGCGTACCG ACGGCGCCGT CGCCGCGCTC ACCAAGGCGG GCTTCCCGGC CGCCAACGTG
CTGACCAGCC CGCAGGCCAA GACGGATACC GAAGCCGCCT TCAACGCCGC CAACATCACC
CTGACCAAGA ACCCGAAGTT CAAGCACTGG ATCGCCTTCG GCCTGAATGA CGAAGCTGTG
CTCGGTGCCG TGCGCGCAGC GGAAGGCCAC GGCGTGAAGC CGGCGGACAT CATCGGGGTG
GGGATCGGCG GCAGCCAGTC GGCGCTCAAC GAGTTCGCCA AGCCCGAGAA GACCGGCTTC
TTCGGCACCG TGCTGATCAG CCCGAAGCGC CACGGCTATG AAACCTCGCT CAACATGTAC
GAGTGGATCA AGAACAACAA GGCGCCGGAC CCGCTCATCC TGACCAGCGG CCGCCTGATG
ACGCGCGACA ACGAAAAGGC CGTCCGCCAA GAGATGGGTC TGTGA
 
Protein sequence
MQQQRRGTFK AIAAATLFAM AGGLTVFAHA ADDVKIGFLV KQPEEPWFQD EWKFADQAAK 
EKGFKLVKIG VPSGGEVLTA IDNLGAQHAQ GFVICVPDVK LGPAVVAKAK QNNLKLMTVD
DRLVDGGGKP IEAVPHMGIS ATKIGEQVGD AIAQEMKKRG WNLSEVGAIR IAYDQLPTAK
ERTDGAVAAL TKAGFPAANV LTSPQAKTDT EAAFNAANIT LTKNPKFKHW IAFGLNDEAV
LGAVRAAEGH GVKPADIIGV GIGGSQSALN EFAKPEKTGF FGTVLISPKR HGYETSLNMY
EWIKNNKAPD PLILTSGRLM TRDNEKAVRQ EMGL