Gene Rpic12D_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2578 
Symbol 
ID8020242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2714512 
End bp2715510 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content62% 
IMG OID644831358 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002982521 
Protein GI241664161 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA AGATCGGCAT CAACGGCTTC GGCCGCATCG GACGCATGGT GTTCCGCGCC 
GCCGCCGCCA ACTTCAAGGA CATCGAAGTT GTTGCCATCA ACGACCTGCT CGAGCCCGAC
TACCTAGCGT ACATGCTGAA GTACGACTCG GTGCACGGCC GCTTCGACGG TGAAGTGTCG
GTCGACGGCA ACACGCTCGT CGTCAACGGC AAGAAGATCC GCCTGACCGC CGTGAAGGAC
CCGTCCGAGC TGAAGTGGGG CGAAGTCGGC GCCGACGTGG TGATCGAATC GACCGGCATC
TTCCTGACCA AGGAAGGCGC GCAGAAGCAC ATCGACGCGG GCGCCAAGAA GGTGATCATG
TCGGCCCCGT CGAAGGACGA CACCCCGATG TTCGTGTACG GCGTGAACCA CGAAACGTAC
AAGGGCGAGG CGATCATCTC CAACGCTTCG TGCACGACCA ACTGCCTGGC ACCGGTTGCC
AAGGTGCTGA ACGACAAGTG GGGCATCAAG CGCGGCCTGA TGACGACCGT GCACGCTGCC
ACTGCCACGC AGAAGACCGT TGACGGCCCG TCCAACAAGG ACTGGCGCGG CGGCCGCGGC
ATCCTGGAAA ACATCATCCC GTCGTCGACC GGCGCCGCCA AGGCCGTGGG CGTGGTGATT
CCGCAGCTGA ACAAGAAGCT GACCGGCATG TCGTTCCGCG TGCCGACCTC GGATGTGTCG
GTCGTCGACC TGACGGTTGA ACTGGAAAGC GCCGCCACGT ACGCTGAAAT CTGCGCCGAA
ATGAAGGCAC AGAGCGAAGG CGCACTGAAG GGCGTGCTCG GCTACACCGA AGACAAGGTC
GTCGCTACGG ATTTCCGCGG CGATGCCCGC ACCTCGATCT TCGACGCCGA AGCCGGCATC
GCACTGGACG GCACCTTCAT CAAGGTCGTG AGCTGGTACG ACAACGAGTG GGGTTATTCG
AACAAGTGCC TGGAAATGGC ACGTGTGGTG GGCAAGTAA
 
Protein sequence
MTIKIGINGF GRIGRMVFRA AAANFKDIEV VAINDLLEPD YLAYMLKYDS VHGRFDGEVS 
VDGNTLVVNG KKIRLTAVKD PSELKWGEVG ADVVIESTGI FLTKEGAQKH IDAGAKKVIM
SAPSKDDTPM FVYGVNHETY KGEAIISNAS CTTNCLAPVA KVLNDKWGIK RGLMTTVHAA
TATQKTVDGP SNKDWRGGRG ILENIIPSST GAAKAVGVVI PQLNKKLTGM SFRVPTSDVS
VVDLTVELES AATYAEICAE MKAQSEGALK GVLGYTEDKV VATDFRGDAR TSIFDAEAGI
ALDGTFIKVV SWYDNEWGYS NKCLEMARVV GK