Gene Rpic12D_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2560 
Symbol 
ID8020224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2694096 
End bp2694458 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content59% 
IMG OID644831340 
Productaspartate alpha-decarboxylase 
Protein accessionYP_002982503 
Protein GI241664143 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.566857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA ACATGCTTCG CGCCAAGCTG CACCGCGCGA CGGTCACACA GGCTGATCTG 
GACTACGAAG GTTCATGCGG TATTGACGAG GACCTCCTCG ACGCCGCCGA CATGCGCGAA
TACGAAAAGA TCGAGCTGTA CAACGTCAAC AATGGCGAGC GTTTCTCCAC CTACATCATC
AAGGGCAAGC GCGGCTCGGG CGAAATCTCG CTCAACGGTG CCGCAGCGCG CCGCGCGCAC
GTGGGTGATC TGCTGATCAT CTGCACTTAC GCGCCGATGA ACGAAGAAGA AGTCGCCAGC
TACAAGCCCA AGGTCGTGCT GCTGGGCGAG GGCAACAAGA TCAAGGCCAT CAAGGAAACC
TGA
 
Protein sequence
MQRNMLRAKL HRATVTQADL DYEGSCGIDE DLLDAADMRE YEKIELYNVN NGERFSTYII 
KGKRGSGEIS LNGAAARRAH VGDLLIICTY APMNEEEVAS YKPKVVLLGE GNKIKAIKET