Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2560 |
Symbol | |
ID | 8020224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2694096 |
End bp | 2694458 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644831340 |
Product | aspartate alpha-decarboxylase |
Protein accession | YP_002982503 |
Protein GI | 241664143 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0853] Aspartate 1-decarboxylase |
TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.566857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCA ACATGCTTCG CGCCAAGCTG CACCGCGCGA CGGTCACACA GGCTGATCTG GACTACGAAG GTTCATGCGG TATTGACGAG GACCTCCTCG ACGCCGCCGA CATGCGCGAA TACGAAAAGA TCGAGCTGTA CAACGTCAAC AATGGCGAGC GTTTCTCCAC CTACATCATC AAGGGCAAGC GCGGCTCGGG CGAAATCTCG CTCAACGGTG CCGCAGCGCG CCGCGCGCAC GTGGGTGATC TGCTGATCAT CTGCACTTAC GCGCCGATGA ACGAAGAAGA AGTCGCCAGC TACAAGCCCA AGGTCGTGCT GCTGGGCGAG GGCAACAAGA TCAAGGCCAT CAAGGAAACC TGA
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Protein sequence | MQRNMLRAKL HRATVTQADL DYEGSCGIDE DLLDAADMRE YEKIELYNVN NGERFSTYII KGKRGSGEIS LNGAAARRAH VGDLLIICTY APMNEEEVAS YKPKVVLLGE GNKIKAIKET
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