Gene Rpic12D_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2558 
Symbol 
ID8020222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2692092 
End bp2692586 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID644831338 
ProductNUDIX hydrolase 
Protein accessionYP_002982501 
Protein GI241664141 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.475051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAG CTGTCCGCTG GAAACCCAGC GTAACTGTTG CCGCCGTCAT TGAACAAGAT 
GGGCGCTTTC TGCTGGTTGA GGAGCACACC GACGTCGGCT TGCGCCTGAA CCAGCCTGCC
GGCCATCTCG ACCCGGACGA AAGCCTGGTC GATGCCGTCG CACGCGAGGC GCTGGAAGAA
ACCGCGTACA GCTTTGTGCC GACCGCCTTC CTGGGCTGCT ACATGGCGCA GTTCCAACCG
CCGCAAGGGG ATCCGGTCAC CTACGTCCGG ATGGCATTTA CGGGCGAGCT TGGCCCCCAA
GATCCGCGCC GCACGCTGGA CGACGGCATC GTTCGCACTG TCTGGATGAC GCCGGATGAA
ATTCGCGCCA GCCGCGAGCG CCATCGCAGC CCGTTGTTGC TCGCGTGCGT TGAAGACTAC
CTGGCCGGCA AGCGCTACCC GCTCGACGTC CTCCATACGC ACGCCAGCGT GTACGGGCTG
GGAGCGCAGC TATGA
 
Protein sequence
MNQAVRWKPS VTVAAVIEQD GRFLLVEEHT DVGLRLNQPA GHLDPDESLV DAVAREALEE 
TAYSFVPTAF LGCYMAQFQP PQGDPVTYVR MAFTGELGPQ DPRRTLDDGI VRTVWMTPDE
IRASRERHRS PLLLACVEDY LAGKRYPLDV LHTHASVYGL GAQL