Gene Rpic12D_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2553 
Symbol 
ID8020217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2686208 
End bp2686789 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID644831333 
Productcytochrome B561 
Protein accessionYP_002982496 
Protein GI241664136 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.885989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.411403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG CCGCCCACTC GAATCCCGCC ATGCGCGGCG CCCCTGACCA CGGCGCCTAT 
ACCAAGCCGG CGATTGCGAT GCACTGGATC ATCGCGCTGC TGATCTTCGC GGCCTTCGGG
CTCGGTCTGT ACATGACCGA TATCCCGGGC TTTACGCCCA CCAAACTGAA ACTGTTCTCG
TATCACAAAT GGATCGGCAT CACGGTGCTG ATCTTTGCGG TGCTGCGCGT GCTGTGGCGC
TTGACCCATC CCGCGCCGGC CCCCGTGCAA GGTATGCCGA AGTGGCAGCA CGCCGCCGCG
GAAGCCGCGC ACATCGGGTT GTATCTGTTG ATTCTCGCGG TGCCGCTGAC CGGCTATCTG
CTCAGCGTCG CGGCCGGCGT CAAGGTTGTC TATCTTGGCC TGTGGGAGCT GCCGATGCCA
TTCGACAAGA GCGACGCGCT GAAAGACATC TTCGGCATCG CGCACGAATG GCTGAACTGG
ACCATGGCGG CCATCGTCGT GGTGCACATC CTGGCTGCGC TCAAGCATCA CGTCGTCGAT
CGTGATGGCA CGCTGCGTCG CATGGTGCCT TTCCTCCGCT GA
 
Protein sequence
MSQAAHSNPA MRGAPDHGAY TKPAIAMHWI IALLIFAAFG LGLYMTDIPG FTPTKLKLFS 
YHKWIGITVL IFAVLRVLWR LTHPAPAPVQ GMPKWQHAAA EAAHIGLYLL ILAVPLTGYL
LSVAAGVKVV YLGLWELPMP FDKSDALKDI FGIAHEWLNW TMAAIVVVHI LAALKHHVVD
RDGTLRRMVP FLR