Gene Rpic12D_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2552 
Symbol 
ID8020216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2685536 
End bp2686108 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content60% 
IMG OID644831332 
ProductYceI family protein 
Protein accessionYP_002982495 
Protein GI241664135 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.370741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.285953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTG TTGTGCGCCC CCGCGCCATC GCCCTGGTTG CAGCCGGCGC GCTGTCGATC 
GCTGCCGTAT CGGTATCGGC CATTGCCCAG GTGGATGCTG CCAAGAGCAG CGTCACCGCC
ACCGGCAAGC AACTCGGTGT ACCGATGGAT ATCAAGTTCG GCAAGTTCGA TGCTGCCGTC
AATTACAACC CGGCCAACGT GGCGGCCTCG ACGGCGAAGG TCGATATCGA TGTCACCAGC
GTCGACGTGG GCAGCAAGGA ATACAACGAC GAACTGAAGA AGAAGGACTG GTTCGACACC
GCCAAGTACC CGAAGGCCAC GTTCGTGTCG TCGACGTTCG AGCCCGGTGC GGGCGGCAAG
GTGGACGTGG TCGGTAAGCT GACCATCAAG GGCATCACGC AGGATGTCAC CGCACCCGTC
ACGTTCAAGC AAGAAGGCGC CAATCAGGTC TTTGAAGGCG CATTCCCGGT CAAGCGCAAT
GCATTCAAGG TAGGTGACGG TGAATGGAAA GACACGTCGG TCGTCTCCGA CGACGTGACG
ATCAAGTTCC GCGTCGTCAT CGCCAAGAAG TAA
 
Protein sequence
MKRVVRPRAI ALVAAGALSI AAVSVSAIAQ VDAAKSSVTA TGKQLGVPMD IKFGKFDAAV 
NYNPANVAAS TAKVDIDVTS VDVGSKEYND ELKKKDWFDT AKYPKATFVS STFEPGAGGK
VDVVGKLTIK GITQDVTAPV TFKQEGANQV FEGAFPVKRN AFKVGDGEWK DTSVVSDDVT
IKFRVVIAKK