Gene Rpic12D_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2551 
Symbol 
ID8020215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2684875 
End bp2685471 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content60% 
IMG OID644831331 
ProductYceI family protein 
Protein accessionYP_002982494 
Protein GI241664134 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.277477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.298445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC GTACCCTCGT TGCCGCATTG TCGGCCGTTG CTGCCACCGC CGCATTTGCT 
GCCCCCGCTA CGTACCAGCT CGACCCGAGC CATACGTACC CGAGCTTTGA AGCCGACCAC
ATGGGCGGTC TGTCGAAGTG GCGCGGCAAG TTCGAAAAGT CCAGCGGCAC TGTGACGCTG
GATCGCGCCG CCAAGACCGG CAGCATCGAC GTGACCGTGC AGACCGACAG CATTGACTTC
GGTCTTGCCA AGATGAACGA GCACGCCAAG AGCGCCGAGA TCTTCGACGT GACCAAGTAC
CCGACCGCCA CGTTCAAGGG CAACTTCACG AAGTTCAAGG GCGACGTGCC GACCGAAGCC
GAAGGCCAAC TGACGCTGCA CGGCGTGACC AAGCCCGCCA AGCTGCAAAT CGACGCGTTC
AAGTGCATTC AGCATCCGAT GCTCAAGCGT GAAGTCTGCG GCGCCGATGC CGAGATGACC
TTCAAGCGCG ATGACTTCGG CGTCGATTAC GGCAAGGCCT ACGGTTTCAA CATGGAAACC
AAGCTGAAGA TCCAGGTGGA AGGCGTCAAG CAAGACGCCA GCGTCGCGCA GCAATAA
 
Protein sequence
MKLRTLVAAL SAVAATAAFA APATYQLDPS HTYPSFEADH MGGLSKWRGK FEKSSGTVTL 
DRAAKTGSID VTVQTDSIDF GLAKMNEHAK SAEIFDVTKY PTATFKGNFT KFKGDVPTEA
EGQLTLHGVT KPAKLQIDAF KCIQHPMLKR EVCGADAEMT FKRDDFGVDY GKAYGFNMET
KLKIQVEGVK QDASVAQQ