| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2547 |
|---|
| Symbol | tgt |
|---|
| ID | 8020211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2680143 |
|---|
| End bp | 2681294 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644831327 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_002982490 |
|---|
| Protein GI | 241664130 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0677193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGT ACGAACTGCT CACCACCGAT GGCCTCGCCC GACGCGGCCG CATGACCCTG
AACCACGGCG TGGTCGAAAC GCCCATCTTC ATGCCGGTGG GCACCTATGG CGCGGTCAAG
GCGATGTCCC CGGCGGAGCT GAAGGACATT GGCGCGCAGA TCATTCTGGG CAACACGTTC
CACCTGTGGC TGCGCCCGGG CCTGGAAGTG ATGGACGCGC ACAAAGGCCT GCACGGCTTC
AACGGCTGGG ACAAGCCTGT CCTGACGGAT TCCGGTGGTT TTCAGGTGTT TTCACTGGGC
GATCTGCGCA AGATCACCGA AGAAGGCGTG ACGTTCGCGT CGCCCATCAA TGGCGACAAG
CTGTTCCTGT CGCCCGAGAT CTCGATGCAG ATCCAGCGCC GGCTGAACTC GGACATCGTC
ATGCAGTTCG ATGAATGCAC GCCTTACAAG ATCGGCGACC GCCCGGCAAC GGAAGCTGAA
GCTGCCGCTT CCATGCGCAT GAGCCTGCGC TGGGCACAGC GCTCGCGTAA CGAATTCGAG
CGCGAACACA ATCCGAATGC GCTGTTCGGC ATCGTGCAGG GAGGCATGTT CGAGCACCTG
CGCGATGAAT CGCTGGCCGG CTTGCAAGCG ATTGACGCCG ATGCGGGCGG CGAAGGTTTC
GGCGGCTATG CCATCGGCGG CCTGTCGGTC GGCGAGCCCA AGGAAGACAT GATGCGCGTG
CTGCAGCACG TGGCGCCGCG TCTGCCGGCC AACAAGCCGC ATTACCTGAT GGGCGTCGGT
ACGCCAGAAG ACCTGGTGGC GGGCGTCGCC AGCGGCGTCG ACATGTTCGA CTGCGTAATG
CCGACCCGCA ACGCGCGCAA CGGCTGGCTC TTCACTCGCT TTGGCGACAT CAAGATCAAG
AACGCGGTAC ACCGCAACGA TCCGCGCCCG CTGGACGAGA CCTGCGGCTG CTACACCTGC
AGCAATTTCT CGCGCGCCTA CCTGCACCAC CTGCAGCGCG TGGGCGAGAT CCTGGGCGCC
CGGCTGAACA CGATCCACAA CCTCTATTAC TACCTGGAAC TGATGGCCGA AATGCGCGCC
GCCATTGAGT CGCACGGCTT TGCCGCATTC CAGGCGCGCT TTGCCGCAGA CCGCGCGCGC
GGGGCCCTGT AA
|
|---|
| Protein sequence | MLKYELLTTD GLARRGRMTL NHGVVETPIF MPVGTYGAVK AMSPAELKDI GAQIILGNTF
HLWLRPGLEV MDAHKGLHGF NGWDKPVLTD SGGFQVFSLG DLRKITEEGV TFASPINGDK
LFLSPEISMQ IQRRLNSDIV MQFDECTPYK IGDRPATEAE AAASMRMSLR WAQRSRNEFE
REHNPNALFG IVQGGMFEHL RDESLAGLQA IDADAGGEGF GGYAIGGLSV GEPKEDMMRV
LQHVAPRLPA NKPHYLMGVG TPEDLVAGVA SGVDMFDCVM PTRNARNGWL FTRFGDIKIK
NAVHRNDPRP LDETCGCYTC SNFSRAYLHH LQRVGEILGA RLNTIHNLYY YLELMAEMRA
AIESHGFAAF QARFAADRAR GAL
|
|---|
| |