| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2545 |
|---|
| Symbol | |
|---|
| ID | 8020209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2676791 |
|---|
| End bp | 2678938 |
|---|
| Gene Length | 2148 bp |
|---|
| Protein Length | 715 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831325 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_002982488 |
|---|
| Protein GI | 241664128 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.419698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.139865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACG CTGATACTGC GGCGGCGCCC AAGCCAAAGC GCGCGGCCAC GGCAGATAAA
GCGGCCAAGG CCACGGCAAA ATCGGCCCGC CCGGCCGACA AACTCGCCAA GCTGGGCCTG
CATCGCGATG TCGATCTCGT CTTGCATCTG CCGATGCGCT ATGAGGACGA GACCACGCTC
CTGACCATTG CCGAAGCTAC GGCGCGGGCC AATACCGGCT GGGCCGCGCA GGTGGAAGGC
ACGGTCACGC GCAATGAAGT GGCGTTCCGG CCGCGCCGGC AACTCGTCGT GCATATCGCC
GATGACTCGG GCGAGCTGGT TCTACGCTTT CTCAACTTTT ACGGCAGCCA AGTCAAGCAG
ATGGCCGAGG GCGTGCGCCT GCGTGTGCGC GGCGAAGTGC GCGGTGGTTT CTTCGGCGCC
GAGATGGTGC ACCCGACCGT GCGCGCGGTG GCAGAGGATG AACCGCTGCC CGACCGTCTG
ACACCGGTGT ATCCGAGCAC CGCTGGCGTG GCGCAGGCCT ATTTGCGCAA GGCGATCCTG
AACGCACTTG CGCGTACGCC GCTGCCGGAA ACGCTGCCGA ACAGCCTCAT CACCGGTCCG
CTCGCCCCGC TCAAGTTGAT GACGCCCGCC GACGCCGTGC GCCTGCTGCA TCAGCCGAGT
CCCGATGTCG ACGAGCACAG CCTCGTCGAG CGCACGCACC CGGCGTGGCT GCGCATCAAG
TTCGATGAAC TGCTGTCGCA GCAGCTGTCG CTCAAGCGGG CGCAGGCCGC GCGCCGCATG
CGCAACGCGC CCATCCTGCG CGACAGCGGC AAGGATGGGC TGCTCGCGCG GTTCATGAAT
GCGCTGCCGT TCAAGCTGAC CGGCGCGCAG GCCCGCGTGT GGGATGAGAT CCGCGCCGAC
CTCGCACACC CGTACCCGAT GCAGCGGTTG CTCCAGGGCG ACGTGGGCAG CGGCAAGACC
GTCATTGCGG CGCTGGCGGC CTGCCAGGCC ATCGATGCCG GCTGGCAGGC TGCGCTGATG
GCGCCGACCG AACTCCTGGC CGAGCAGCAC TACCGCAAGC TTTCCGCATG GCTGGAACCG
CTGGGTGTGG ACATCGTCTG GCTGGCTGGC AGCCTCAAGC GCAAGCAGAA GGACGAAGCG
GCTGCGCGTG TGGCCGCCGG CACCGCGCAA CTCGTGATTG GCACCCACGC GCTGATCCAG
GATGCGGTTA CGTTCGCGCG CCTCGGCCTG GCGGTGGTGG ATGAGCAGCA TCGATTTGGC
GTGGCACAGC GGCTTGCCCT GCGCGGCAAG GCAAGCAACG GCGATGCACC TGCCGCCAAC
GCCCAGGTGC CGCACCAGCT GATGATGTCC GCCACGCCGA TCCCGCGCAC GCTCGCGATG
ACGTACTACG CCGACCTCGA CGTCTCCGCC ATCGACGAGT TGCCGCCCGG GCGCACGCCC
ATCGTCACGC GCCTGGTGAA CGATGCGCGG CGCGACGAAG TGATCGAACG CATCTACGCC
GCGGCACGCG AGGGGCGACA GGTCTACTGG GTTTGCCCGC TGATCGAGGA AAGCGAAGCG
CTGCAATTGC AGACCGCCGT TGAAACCTTC GAGACGCTGT CGCAAAGTCT GCTAGGACTG
AAGGTCGGTC TTGTGCACGG ACGCCTGCCA TCCGCCGAGA AGGCCGCCGT GATGAGCGCC
TTCGCCGGCG GCGGCCTGCA CGTGCTGGTC GCCACGACCG TTATCGAGGT GGGTGTGGAC
GTGCCCAATG CCTCGTTGAT GGTGATCGAG CACGCCGAGC GCTTTGGTCT TGCGCAGCTG
CACCAGCTAC GCGGGCGGGT GGGGCGCGGC ACAGCGGAAT CCGTGTGCGT GCTGCTGTAC
CAGGCGCCGC TGTCGCCGAC GGCCAAGCAG CGCCTGCAGA CCATGCGCGA GACCACCGAT
GGTTTCGAGA TCGCCCGACG CGATCTGGAG ATCCGCGGGC CCGGTGAATT CCTCGGCGCG
CGGCAATCAG GCGAAGCGAT GCTGCGTTTT GCCGATCTGA ACCACGATGC GTGGCTCGTT
GAGTTCGCGC AGGGTGCGGC GGACGCGATG CTCGCGCGCT TTCCTGAAGC GGTGGACACC
CACCTCAAGC GCTGGCTGGG CGAGCGCGAG CACTACCTGC GCGTTTAA
|
|---|
| Protein sequence | MPDADTAAAP KPKRAATADK AAKATAKSAR PADKLAKLGL HRDVDLVLHL PMRYEDETTL
LTIAEATARA NTGWAAQVEG TVTRNEVAFR PRRQLVVHIA DDSGELVLRF LNFYGSQVKQ
MAEGVRLRVR GEVRGGFFGA EMVHPTVRAV AEDEPLPDRL TPVYPSTAGV AQAYLRKAIL
NALARTPLPE TLPNSLITGP LAPLKLMTPA DAVRLLHQPS PDVDEHSLVE RTHPAWLRIK
FDELLSQQLS LKRAQAARRM RNAPILRDSG KDGLLARFMN ALPFKLTGAQ ARVWDEIRAD
LAHPYPMQRL LQGDVGSGKT VIAALAACQA IDAGWQAALM APTELLAEQH YRKLSAWLEP
LGVDIVWLAG SLKRKQKDEA AARVAAGTAQ LVIGTHALIQ DAVTFARLGL AVVDEQHRFG
VAQRLALRGK ASNGDAPAAN AQVPHQLMMS ATPIPRTLAM TYYADLDVSA IDELPPGRTP
IVTRLVNDAR RDEVIERIYA AAREGRQVYW VCPLIEESEA LQLQTAVETF ETLSQSLLGL
KVGLVHGRLP SAEKAAVMSA FAGGGLHVLV ATTVIEVGVD VPNASLMVIE HAERFGLAQL
HQLRGRVGRG TAESVCVLLY QAPLSPTAKQ RLQTMRETTD GFEIARRDLE IRGPGEFLGA
RQSGEAMLRF ADLNHDAWLV EFAQGAADAM LARFPEAVDT HLKRWLGERE HYLRV
|
|---|
| |