Gene Rpic12D_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2542 
Symbol 
ID8020206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2673305 
End bp2674252 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content64% 
IMG OID644831322 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002982485 
Protein GI241664125 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.42186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.238303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA CCGAACTCAA ATACATCGTC GCCGTCGCGC GGGAACGCCA CTTTGGGCGT 
GCCGCCGAGG CCTGCTTCGT CTCGCAACCG ACATTGTCGG TCGCCATCAA GAAGCTGGAA
GACGAACTGG CCGTGCAGAT CTTCGAGCGC GGCGCGTCGG AAGTGAGCGT CACGCCCGTC
GGCGAGCAGA TCGTCACGCA GGCGCAACGT GTGCTCGAAC AGACGATGGC GATCCGCGAG
ATCGCCAAGC AGGGGATGGA CCCGCTGGCC GGGCCGCTGC GGCTTGGGGT GATTTATACG
ATCGGCCCTT ACCTGCTGCC CGCGCTGGTC AAGCAGATGA TCAACACCGT CCCGCAGATG
CCGCTGATGC TGCAGGAGAA TTTCACTGTG CGGCTGGTGG AGCTGCTCAA GCAGGGCGAG
ATCGACTGCG CCATCATGGC CGAGCCGTTT CCCGAGGCGG GCCTGATGAC GGTGCCGCTG
TACGACGAGC CTTTTGTCGT GGCGGTGCCG CGCGGTCATG AACTGGCCAA GGCGTCGTCG
GTGGACCCGG AGGCGCTCAA GCAGCAAACC ATGCTATTGC TCGGCAACGG CCATTGCTTC
CGCGATCACG TGCTGGGCGT GTGTCCCGAG CTGTCGCGCT TCTCGCAGAA CGCCGACGGT
ATCCAGAAGA CGTTCGAAGG CTCGTCGCTC GAAACGATCC GGCATATGGT TGCCAGCGGT
GTCGGCATTA CAGTGCTGCC GCGTACATCG GTGCCGAACA TGCAGCCCGC CGCCACCGAT
CTCCTGACCT ACGTACCGTT CCAGGAGCCG GTGCCCGACC GCCGTGTGGT TCTGGCCTGG
CGCAAGAGCT TTACCCGCAT TGCCGCCATC GAGGCGGTGG CCAAGGCGGT CGCGCAATGC
GAACTGCCCG GTGTCAAGCT GTTGCCGCCC ACGCCGCTGA TCCACTGA
 
Protein sequence
MTLTELKYIV AVARERHFGR AAEACFVSQP TLSVAIKKLE DELAVQIFER GASEVSVTPV 
GEQIVTQAQR VLEQTMAIRE IAKQGMDPLA GPLRLGVIYT IGPYLLPALV KQMINTVPQM
PLMLQENFTV RLVELLKQGE IDCAIMAEPF PEAGLMTVPL YDEPFVVAVP RGHELAKASS
VDPEALKQQT MLLLGNGHCF RDHVLGVCPE LSRFSQNADG IQKTFEGSSL ETIRHMVASG
VGITVLPRTS VPNMQPAATD LLTYVPFQEP VPDRRVVLAW RKSFTRIAAI EAVAKAVAQC
ELPGVKLLPP TPLIH