| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2505 |
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| Symbol | |
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| ID | 8020169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2629882 |
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| End bp | 2631021 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644831286 |
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| Product | twitching motility protein |
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| Protein accession | YP_002982449 |
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| Protein GI | 241664089 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.85199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACC GCGAAGCCGC CACCAAATAC ATCCACGAAC TCTTGCAGTT GATGGTGAAC
AGCCGTGGCT CGGACTTGTT CATCACGGCA GAATTTCCGC CCGCGATCAA AGTGGACGGC
AAGGTCACGC CGATCTCTCA GCAGCCGCTG AATGCCCAGC AGGCCCTCGG TCTGGTCAAG
TCGATCATGA ACGAGAAGCA GCTGCGCGAG TATGAAGACA GCTCGGAATG CAACTTCGCC
ATCACGGCGC CGGGCGCCGG GCGTTTCCGC GTGTCGGCGT TCATGCAGCA AGGCCGCGCC
GGCATGGTGC TGCGGACCAT CAACACGAAG ATCCCGACGC TGGGCGAGCT GGACCTGCCG
CCGATCCTGA ACGAGATCGT CATGAGCAAG CGCGGCCTCG TGATCGTGGT GGGTGCCACG
GGCTCGGGCA AGTCGACCTC GCTGGCGGCG ATGGTGGGCT ATCGCAATGC GAATTCGTAC
GGCCACATCA TCACCATCGA AGACCCGGTC GAATACGTGC ACGCGCACCA GAACTGCGTG
GTGACGCAGC GTGAGGTGGG CGTGGATACC GAGTCCTGGC ACGTAGCGCT GAAGAACACG
CTGCGCCAGG CGCCGGATGT GATCCTGATC GGCGAAATCC GCGATCGCGA CACGATGGAA
TACGCGATCC AGTATGCGGA AACCGGCCAC CTGTGCCTCG CCACGCTGCA CGCCAACAGC
TCGAACCAGG CGATCGACCG GATCATCAAC TTCTTCCCGG AAGAAAAGCG TCAACAGCTG
CTGATCGACC TGTCGCTGAA CCTGCGCGCG ATGATTGCGC AACGCCTGCT GCCGCGTCAG
GGTAAGAAAG GGCGCGTGCC GGCCGTCGAA ATCATGCTGG CGACCCCGCT GGTGCAAGAC
CTCATCTTCA AGGGCGAGGT GCACGAGCTG AAGGAGGTCA TGAAGAAATC CCGCGAGCAG
GGGATGATTT CGTTTGACCA GGCGCTGTTC GAGTTGTACG AACAGAACAA GATCACGTAC
GAGGATGCGC TGCGTAACGC GGACTCGCTC AACGACTTGC GCCTGCAGAT CAAGCTGCAC
AGCAAGCGCG GTGGCCAGAC CGACCTGTCT GCCGGCACAG AGCATCTGAA TGTCGTCTGA
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| Protein sequence | MLDREAATKY IHELLQLMVN SRGSDLFITA EFPPAIKVDG KVTPISQQPL NAQQALGLVK
SIMNEKQLRE YEDSSECNFA ITAPGAGRFR VSAFMQQGRA GMVLRTINTK IPTLGELDLP
PILNEIVMSK RGLVIVVGAT GSGKSTSLAA MVGYRNANSY GHIITIEDPV EYVHAHQNCV
VTQREVGVDT ESWHVALKNT LRQAPDVILI GEIRDRDTME YAIQYAETGH LCLATLHANS
SNQAIDRIIN FFPEEKRQQL LIDLSLNLRA MIAQRLLPRQ GKKGRVPAVE IMLATPLVQD
LIFKGEVHEL KEVMKKSREQ GMISFDQALF ELYEQNKITY EDALRNADSL NDLRLQIKLH
SKRGGQTDLS AGTEHLNVV
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