| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2500 |
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| Symbol | |
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| ID | 8020164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2626687 |
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| End bp | 2627418 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831281 |
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| Product | LrgB family protein |
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| Protein accession | YP_002982444 |
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| Protein GI | 241664084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.541582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA TGGCTCCCAA CCTGCACCAA CTCTGGGTCT ACCTGGCCGC CAGCCCGCTG
CTGGGGCTGA CCGCCACGCT CATCGCCTAC CTGATCGGCG TGCGCCTGCA TGAGCGCAGC
CGCTTCAACC CGATGGTCAA TCCGCTGCTG ATTGCGGTCG TCATCCTGGG GACGCTGCTG
ACCGTGACGG GCACGCCGTA CAAGACCTAC TTTGACGGCG CGCAGTTCGT GCACTTCCTG
CTGGGGCCGG CCACGGTGGC GCTGGCGGTG CCGTTGTTTC AGCAGTGGGC GAAGCTGCGC
CGCCACGCGG TACCGCTGAT GGCTGGGCTC CTTGCAGGGT CGGTCGTGGC GGTGGTGTCA
GCCGTGGGCA TCGCGTGGCT GTTGGGCGCA TCGCCGGAAA CGCTGCGCTC CATGGCGCCG
AAATCGGTGA CGATCCCGAT CGCCATGGGC ATCTCGGAGA AGATTGGCGG CGCACCGACC
ATCACGGCGG TGCTGGTGCT CATCACCGGC ATTGTCGGGG CGACGACCAC GACGCGGCTG
CTGAACCTGC TGCGCGTGCG CGAGTACAGC GTGCGTGGTT TTGCCACTGG CATCGCGGCG
CACGGCATCG GTACGGCCCG TGCGTTTCAG GTCAATCCGG AAGCAGGGGC GTTCTCCGCA
TTGGGCATGG GCTTGAATGG CGTGCTGACA GCGGTGCTGG TGCCGCTGCT GGCGGGCTGG
ATTCCGCACT GA
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| Protein sequence | MNAMAPNLHQ LWVYLAASPL LGLTATLIAY LIGVRLHERS RFNPMVNPLL IAVVILGTLL
TVTGTPYKTY FDGAQFVHFL LGPATVALAV PLFQQWAKLR RHAVPLMAGL LAGSVVAVVS
AVGIAWLLGA SPETLRSMAP KSVTIPIAMG ISEKIGGAPT ITAVLVLITG IVGATTTTRL
LNLLRVREYS VRGFATGIAA HGIGTARAFQ VNPEAGAFSA LGMGLNGVLT AVLVPLLAGW
IPH
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