Gene Rpic12D_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2478 
Symbol 
ID8020142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2595206 
End bp2595997 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID644831259 
ProductABC transporter related 
Protein accessionYP_002982422 
Protein GI241664062 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4525] ABC-type taurine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.133156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA TCGATGTGCG CGGCCTGGGC GTCGACTACA TCGACGCGCA CGGCCGCACC 
ACCCGCGCGC TGGCCGGTGT GGATTTGTCG ATCGACGCCG GCGAATTCGT CGTTGCCCTG
GGCGCCTCCG GCTGCGGCAA GACCACGCTG CTGAACTGCC TCGCGGGTTT TGTTGCCCCC
ACGTCGGGCC AGATCCTGCT GGACGACCGC GAAGTCGATG GCCCCGGCGC GGACCGCGGC
GTGGTGTTCC AGCGCTATGG GCTCATGCCG TGGCTGAACG TGCGTGACAA CGTGGCGCTT
GGCCTCAAGC TGCGCGGTGT CGACCGCAAG ACGCGCCATG CGCGTGCGCT GGAGTTGCTC
GGGCTGGTGG GCCTGGAAGC GCATGCCGCA TCGCCCGTCT ACGCGTTGTC AGGCGGCATG
CAGCAACGCG TTGGCATTGC CCGTGCGCTG GCCACCGAGC CCCGCGTGCT GCTGATGGAC
GAACCGATGG GCGCGCTCGA CGCGTTCACG CGCGAGACCA TGCAGACGCT GGTGCTCGAC
GTCTGGCAAC GCACCGGCAC GACCGTCTTC TTCATCACCC ACGACGTGGA GGAGGCGCTG
TTCCTGGCGA CGCGCCTGAT CGTGATGTCG CCATCGCCGG GGCGCATCGT GCAGACATTC
GATTTGCCGT TCTCGCGGCA GGCTCTGGCA GGCGGGGACG CCCGCGCGGT GAAATCGTCG
CCGGAATTCA TTGCCTGGCG CGAGCGTGTG CTGGCGCTGA TTCACCATGC GCCCGAGGCG
CTGCTCGCAT GA
 
Protein sequence
MSRIDVRGLG VDYIDAHGRT TRALAGVDLS IDAGEFVVAL GASGCGKTTL LNCLAGFVAP 
TSGQILLDDR EVDGPGADRG VVFQRYGLMP WLNVRDNVAL GLKLRGVDRK TRHARALELL
GLVGLEAHAA SPVYALSGGM QQRVGIARAL ATEPRVLLMD EPMGALDAFT RETMQTLVLD
VWQRTGTTVF FITHDVEEAL FLATRLIVMS PSPGRIVQTF DLPFSRQALA GGDARAVKSS
PEFIAWRERV LALIHHAPEA LLA