Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2478 |
Symbol | |
ID | 8020142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2595206 |
End bp | 2595997 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644831259 |
Product | ABC transporter related |
Protein accession | YP_002982422 |
Protein GI | 241664062 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4525] ABC-type taurine transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.133156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGCA TCGATGTGCG CGGCCTGGGC GTCGACTACA TCGACGCGCA CGGCCGCACC ACCCGCGCGC TGGCCGGTGT GGATTTGTCG ATCGACGCCG GCGAATTCGT CGTTGCCCTG GGCGCCTCCG GCTGCGGCAA GACCACGCTG CTGAACTGCC TCGCGGGTTT TGTTGCCCCC ACGTCGGGCC AGATCCTGCT GGACGACCGC GAAGTCGATG GCCCCGGCGC GGACCGCGGC GTGGTGTTCC AGCGCTATGG GCTCATGCCG TGGCTGAACG TGCGTGACAA CGTGGCGCTT GGCCTCAAGC TGCGCGGTGT CGACCGCAAG ACGCGCCATG CGCGTGCGCT GGAGTTGCTC GGGCTGGTGG GCCTGGAAGC GCATGCCGCA TCGCCCGTCT ACGCGTTGTC AGGCGGCATG CAGCAACGCG TTGGCATTGC CCGTGCGCTG GCCACCGAGC CCCGCGTGCT GCTGATGGAC GAACCGATGG GCGCGCTCGA CGCGTTCACG CGCGAGACCA TGCAGACGCT GGTGCTCGAC GTCTGGCAAC GCACCGGCAC GACCGTCTTC TTCATCACCC ACGACGTGGA GGAGGCGCTG TTCCTGGCGA CGCGCCTGAT CGTGATGTCG CCATCGCCGG GGCGCATCGT GCAGACATTC GATTTGCCGT TCTCGCGGCA GGCTCTGGCA GGCGGGGACG CCCGCGCGGT GAAATCGTCG CCGGAATTCA TTGCCTGGCG CGAGCGTGTG CTGGCGCTGA TTCACCATGC GCCCGAGGCG CTGCTCGCAT GA
|
Protein sequence | MSRIDVRGLG VDYIDAHGRT TRALAGVDLS IDAGEFVVAL GASGCGKTTL LNCLAGFVAP TSGQILLDDR EVDGPGADRG VVFQRYGLMP WLNVRDNVAL GLKLRGVDRK TRHARALELL GLVGLEAHAA SPVYALSGGM QQRVGIARAL ATEPRVLLMD EPMGALDAFT RETMQTLVLD VWQRTGTTVF FITHDVEEAL FLATRLIVMS PSPGRIVQTF DLPFSRQALA GGDARAVKSS PEFIAWRERV LALIHHAPEA LLA
|
| |