Gene Rpic12D_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2470 
Symbol 
ID8020134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2586390 
End bp2586788 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID644831251 
ProductRNA-binding S4 domain protein 
Protein accessionYP_002982414 
Protein GI241664054 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.264328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA GCACCGACGC TGCCGATCGC GTGCGCATCG ACAAATGGCT GTGGGCGGCA 
CGCTTTTTCA AGACGCGGTC TCAGGCGACG GATGCGGTGG AGCGTGGTCG CGTGCAAATC
AACGATCAGG CGGTTCGCCC CGCCAAGGAC GTCAAAATCG GCGATCACGT GCGCGTGCAC
GCGCATGAAC AGCAGTGGGA AGTGGAGGTA TTGGCGCTGG CGGAAGTGCG CGGCCCCGCT
TCGGTCGCTC AAACCCTCTA TGCCGAGACG GACATCAGCC GCTTAAAACG CCAGGAGAGC
GCCGACAAAC GCCGACTGTA TCGGGAACCC GCCACACAAA TTGCCGGCCG GCCCACTAAG
CGAGACCGGC GGCGCATCGA CAAACTCGGC GGAGAATGA
 
Protein sequence
MKVSTDAADR VRIDKWLWAA RFFKTRSQAT DAVERGRVQI NDQAVRPAKD VKIGDHVRVH 
AHEQQWEVEV LALAEVRGPA SVAQTLYAET DISRLKRQES ADKRRLYREP ATQIAGRPTK
RDRRRIDKLG GE