Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2462 |
Symbol | |
ID | 8020126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2577223 |
End bp | 2579121 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644831243 |
Product | para-aminobenzoate synthase, subunit I |
Protein accession | YP_002982406 |
Protein GI | 241664046 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0699736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.734756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCCGC TCCAAGCGCC AGACGCCGGC GCGCCGTTCG CGCTGCTGGA CGATGCCACC TCGGGCGGCG CGCCGTGCTC GCGCTGGTAC ACCGGTTATG CGGGCGAGTT CTTCCGGCCG GCGGGCATCC TGGATGGGCT GGACGATGAC CTTCGTGCCG CCTGGCGCCA GGGCTTGCAT GCCCTGATCG TTGCGCCGTA TGAGTTTGGC GAGCCGCTGA TCGGCCTGCC GGCTTCCACC GAAATCTCTT CGTCCTTGCC CGGCCACGAC GGCCGCCTGC GCGTGCTGCT GTTTCGCACG ATGCAGGTGC TGTCGCCGGC AGAGGTCGAC AGGCTGTTCG ACGCCTGGCC TGACGCGACC GGTGCAGCCG GTCTGTTTGA CTGTGCGGCC AGCCTTGATC ACGCCACCTA TACCAACGCC ATCGCGCGCA TCCACGACTG GATTGCGGCG GGCGACACTT ACGAAGTCAA CTACACGTAC CGCCTGCGCA TGACTGCGTT CGGCGCGCCG GCGGCGTTGT ATCGGCGCCT GCGTGCGCGC CAGCCGGTGC CGTACGGCGC CTTCATCGGG CTGCCGGAAG GCGCCGCGAT TCTGTCGTGC TCGCCGGAGC TGTTCTTTTC GCATCGCGCG GGCCAGCTTG TCGCGCGGCC GATGAAGGGC ACCGCGCCAG CCTCGGGCGA CGTCGAAGTC GACGAAGCCC GCGCCATCGC GCTGGCCGCA GACGAAAAGA ACCGCGCCGA GAACTTGATG ATCGTCGACC TCTTGCGCAA CGATCTGGGC CGCCTCGCGC GCGCGGGGTC GGTGCGCGTG CCGGCGTTGT TCGAGGTGAC GCCGTTCGGC AGCGTGCTGC AGATGACATC GACGGTGGAG GCCGAGATTC CGCCCGCCAC CGGCCTCGCC GATTGCCTGC GCGCGTTGTT CCCGTGCGGC TCCATCACGG GCGCGCCCAA GCGGCGGACG ATGGAAATCA TCAAGGCGCT GGAGCCGGAG CCGCGCGGCC TGTACACCGG CGCGATCGGC TGGATCGATG CGCCTGCCGA CGATCGCGCG ATGGGCGATG CATGTTTCTC GGTGGCGATC CGCACGCTGG TGCTGAGCGC GCCCGGCACC GATGGGCTGC GCCGCGGCGA ACTTGGCATC GGCTCTGGCA TCGTGCATGA CAGCGTCGCC GACGACGAAT ATGCGGAGTG CCAACTGAAA GCGCGCTTCG TGACGGCGCT TGACCCGGGG TTGTCGTTGT TCGAGACGAT GCGCGCGACG CGCGAGGGCG TGCCACTGCT GGATTGGCAT CTGGCGCGGC TGGAGCGGTC GGCGGCCGCA TTCGGTTTCC CGTTCGATCG CACTGTGCTG ACGAATGACG TGGCGCGTGC GTGCGCAGCG CTCGAAGGCG AGGGCGCTTA TCGGATGCGC TTATTGCTGA CGCCGAATGG CTCGGCAAAC GTATCGGCCG TGCCGCTGTC GCCGCTGCAT GCGAGTTGGA ATGCACCGGT CCGCCTGCTC GCCGCCGCGC AACCGCGCGA GATCACGCAC AGTCTGCCGA CGCACAAGAC CACGTTGCGC GAAGGCTACG ACGCTGCCTG GCAGGCGGCC GAGCGCGAGG GTGCATTCGA TGCGGTGTTC TTCAACGCCG ATGGCACCCT GGCCGAAGGC GGGCGCAGCA CGTTGCTGGT CAAGCTCGAT GGCGCGTGGT GGACGCCGCC GCTGTCAGCG GGGGTCTTGC CGGGGGTGAT GCGCGCCGTG CTGCTGAAAG ACGCTTCGCC GTGGCTGGGC GGGCCGCTGC AAGAGCGCTT GCTCACCCGC GCGGATGTCG CCCGCGCCGA GGCCATCGCC GTATGCAATG CCCTACGCGG CGTGGTGCCC GCGCATTTCG AGCCGGCCCT GTCCGTCGAC GTGCTCTAG
|
Protein sequence | MQPLQAPDAG APFALLDDAT SGGAPCSRWY TGYAGEFFRP AGILDGLDDD LRAAWRQGLH ALIVAPYEFG EPLIGLPAST EISSSLPGHD GRLRVLLFRT MQVLSPAEVD RLFDAWPDAT GAAGLFDCAA SLDHATYTNA IARIHDWIAA GDTYEVNYTY RLRMTAFGAP AALYRRLRAR QPVPYGAFIG LPEGAAILSC SPELFFSHRA GQLVARPMKG TAPASGDVEV DEARAIALAA DEKNRAENLM IVDLLRNDLG RLARAGSVRV PALFEVTPFG SVLQMTSTVE AEIPPATGLA DCLRALFPCG SITGAPKRRT MEIIKALEPE PRGLYTGAIG WIDAPADDRA MGDACFSVAI RTLVLSAPGT DGLRRGELGI GSGIVHDSVA DDEYAECQLK ARFVTALDPG LSLFETMRAT REGVPLLDWH LARLERSAAA FGFPFDRTVL TNDVARACAA LEGEGAYRMR LLLTPNGSAN VSAVPLSPLH ASWNAPVRLL AAAQPREITH SLPTHKTTLR EGYDAAWQAA EREGAFDAVF FNADGTLAEG GRSTLLVKLD GAWWTPPLSA GVLPGVMRAV LLKDASPWLG GPLQERLLTR ADVARAEAIA VCNALRGVVP AHFEPALSVD VL
|
| |