Gene Rpic12D_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2452 
Symbol 
ID8020116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2568455 
End bp2569510 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID644831233 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_002982396 
Protein GI241664036 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.113914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT CCGAAACCCC ATCCGCATCG ACCGGCCTGT CTTACCGCGA CGCGGGCGTC 
GACATCGAGG CGGGTGACGC CCTTGTCGAT CGCATCAAGC CGTTTGCCAA GCGCACTATG
CGCGAAGGCG TGCTGGGCGG CATCGGCGGC TTCGGCGCGC TGTTCGAGCT GTCCAATAAG
TATCAGGAAC CGGTGCTGGT GTCCGGCACC GACGGCGTGG GCACCAAGCT CAAGCTGGCC
TTTGCGTTGA ATCGCCACGA CACGGTTGGC CAGGATCTGG TCGCCATGAG CGTGAACGAC
ATCCTGGTGC AGGGCGCCGA GCCGCTGTTC TTCCTGGATT ACTTCGCCTG CGGCAAGCTC
GACGTCGACA CCGCTGCCAC CGTGGTCAAG GGCATCGCCC AGGGTTGCGA GTTGGCCGGC
TGCGCGCTGA TCGGCGGCGA AACCGCTGAA ATGCCGAGCA TGTACCCGGA CGGCGAATAC
GACCTGGCCG GCTTTGCCGT CGGCGCCGTC GAAAAGCGCA AGATCATCGA CGGCACGACC
ATTGCCGAGG GCGACGTGGT GCTGGGCCTG GCTTCGTCGG GTGCGCATTC GAACGGCTAC
TCGCTGGTGC GCAAGATCAT CGAGGTGTCG CGCCCGGACT TGAACGCCGA TTTCCACGGC
CAGCGCCTGC AGGACGCCAT CATGGCGCCG ACGCGCATCT ACGTGAAGCC GCTGCTGTCG
CTGATCGACA AGCTGACCGT CAAGGGCATG GCGCACATTA CCGGCGGCGG TTTGACCGAA
AACGTGCCGC GCGTGCTGCA GGACAACCTG ACCGCCGTGC TGCACAAGGA CGCGTGGACG
CTGCCGCCGC TGTTCCAGTG GCTGCAGAAG GCCGGCAACG TGGCCGATGA CGAAATGCAC
CGTGTGTTCA ACTGCGGTAT CGGCATGGTC GTGATCGTGT CGCCAGCCGA CGCACCGGCC
GCCATCGCAC ACCTGAAGGA CGCGGGCGAA ACGGTCTACC AGATCGGCGA GATCCGCGCA
CGCCAAGCCG GCGAAGCGCA GACGATCGTG GTCTGA
 
Protein sequence
MSASETPSAS TGLSYRDAGV DIEAGDALVD RIKPFAKRTM REGVLGGIGG FGALFELSNK 
YQEPVLVSGT DGVGTKLKLA FALNRHDTVG QDLVAMSVND ILVQGAEPLF FLDYFACGKL
DVDTAATVVK GIAQGCELAG CALIGGETAE MPSMYPDGEY DLAGFAVGAV EKRKIIDGTT
IAEGDVVLGL ASSGAHSNGY SLVRKIIEVS RPDLNADFHG QRLQDAIMAP TRIYVKPLLS
LIDKLTVKGM AHITGGGLTE NVPRVLQDNL TAVLHKDAWT LPPLFQWLQK AGNVADDEMH
RVFNCGIGMV VIVSPADAPA AIAHLKDAGE TVYQIGEIRA RQAGEAQTIV V