| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2446 |
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| Symbol | |
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| ID | 8020110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2562526 |
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| End bp | 2564544 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644831227 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_002982390 |
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| Protein GI | 241664030 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG AGCTGGGCCA CTTCGCGTTG ATCCTCGCGC TGCTGACTGC GGCCATGCAA
TCCGTGTTGC CGCTGGTTGG TGCGGCGCGC GACGACGAGC GCTGGATGGC CGTGGCGCGT
CCCGCTGCAC GCATGCAGTG CGCATTGGTG CTGCTGGCTT ATGGCGCACT GACGTGGGCG
TTCGTCAGCA ACGATTTCAG CGTGCTCTAT GTCGCCGCCA ACTCGAACAG CGCGCTGCCG
CTGCCCTATC GGGTGGCGGC CGTATGGGGC GGGCACGAGG GATCGATGTT GCTGTGGACG
ACGATGCTGG CGCTGTGGTC GCTGGCCGTG TCGTTGTTCA GCCGGCAACT GCCGTTGCCC
GTCGTGGCGC GCGTGCTGGG CGTGATGGGC GCCATCAGCA CGGGGCTGCT GCTCTTCCTG
CTGTTCGCAT CCAACCCGTT CCTACGCCTG TTGCCGCCGG CCATGGAAGG GCGTGATCTC
AATCCGCTGT TGCAAGACCC GGGCATGGTG TCGCATCCGC CCATGCTCTA CATGGGTTAC
GTGGGCTTTG CGGTGGCGTT CTCGTTTGCG ATGGCCGCGC TCCTATCGGG CCGGCTCGAC
GCCACCTGGG CGCGCTGGTC TCGGCCGTGG ACCACCGCCG CCTGGGCATG CCTGACGACC
GGCATCATGC TCGGCAGCGC TTGGGCGTAC TACGAACTTG GCTGGGGCGG TTGGTGGTTC
TGGGACCCGG TCGAAAACGC TTCGTTCATG CCGTGGCTGG CAGGCACGGC GCTGATCCAC
TCGTTGGCGG TAACGGAAAA GCGCGGCGTG TTCCGCGCAT GGACGGCGCT GCTGGCCATC
TTCACGTTCT CGCTCAGTCT GCTCGGCACG TTCCTCGTCC GCTCGGGCGT GCTGACGTCG
GTGCATGCTT TTGCGGTCGA CCCGAAGCGC GGTCTCTTCA TCCTCGCTTT GCTGGGCATC
GTGACGGGCG GCGCCCTCGG TCTGTTTGCG TGGCGCGCGA AGCGGTTGTC CAGCAACGCG
TCGGAAGGCG CGACGTTCCC GCTGTTCGCG CGTGAATCGT TCCTGCTGGC CAACAACGTG
CTGCTGGCGG TGGCGGCCGC CACGGTATTG CTTGGCACGC TGTATCCGCT TTTGCTGGAT
GTGCTGCGGC TGGGCAAGAT CTCGGTCGGG CCGGCGTATT TCGAACAGGT CTTTGTGCCG
CTGATGTCTC CTGCGGTGCT GCTGATGGGT GCCGCGCCAC TGGCACGCTG GCGTCACGGT
GCGCTGCCGT CGATGGCGGT GCGGCTGCGA TGGGCAGCAG TGGCGAGTGT TGCCGTCGGG
CTCGGACTGG CGGTGATGTA TCGGACGTCC GCGCTGGCGG GCCTGGGGCT GACGCTCGCC
GCATGGTGTC TTCTGAGTGC GCTGGCCAGT CTGGCCGAAA AGCTTCGCCA GCCCGGCAAT
CGATTGACGA CGCTGCGGCA ATTGCCGCCG AGCTACTTTG GCATGCTAGT GGCGCACGCG
GGGGTCGGCG TGTTCATTGC GGGCGTCACG CTGGTGCTCA GCCAGGAGAC GCTACGCGAG
TTGCCGGTGC GCGTGGGCGG CAAGGTGGAG GTGGGCGGCT ACATGTTCCA CCTCACCAGC
GTTGCGCCGG CCCAGGGCCC CAATTACGAC GTCTTGCGCG GCCACGTTGA AGTCAGCCGC
AACGGCAAAC CCGTGGCCAC GCTGCTACCC GAGCGGCGCC TGTACCACAG CCAGGAAACT
CCCACGACCG AAGTCGCCAT CGACAGCGGC ATCACACGCG ATCTCTATGT CGCGCTTGGT
GAATCACTCG GACAAGACAA CTGGGCCATG CGCATCTACA TCAAGCCCTT CGTCAGCTGG
ATCTGGAGCG GCTGTGTGCT GATGGTACTG GGCGGCCTGC TGGCCGTGTG CGACCGCCGC
TACCGGCTGC GCCGCCGCTC CACGTCATCG CGCGCCGCGC CCGACACTGC ACGCGGCGGC
CCGTCATTAG CGATGCCAGC GACCGAGGAG CTACGGTGA
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| Protein sequence | MIAELGHFAL ILALLTAAMQ SVLPLVGAAR DDERWMAVAR PAARMQCALV LLAYGALTWA
FVSNDFSVLY VAANSNSALP LPYRVAAVWG GHEGSMLLWT TMLALWSLAV SLFSRQLPLP
VVARVLGVMG AISTGLLLFL LFASNPFLRL LPPAMEGRDL NPLLQDPGMV SHPPMLYMGY
VGFAVAFSFA MAALLSGRLD ATWARWSRPW TTAAWACLTT GIMLGSAWAY YELGWGGWWF
WDPVENASFM PWLAGTALIH SLAVTEKRGV FRAWTALLAI FTFSLSLLGT FLVRSGVLTS
VHAFAVDPKR GLFILALLGI VTGGALGLFA WRAKRLSSNA SEGATFPLFA RESFLLANNV
LLAVAAATVL LGTLYPLLLD VLRLGKISVG PAYFEQVFVP LMSPAVLLMG AAPLARWRHG
ALPSMAVRLR WAAVASVAVG LGLAVMYRTS ALAGLGLTLA AWCLLSALAS LAEKLRQPGN
RLTTLRQLPP SYFGMLVAHA GVGVFIAGVT LVLSQETLRE LPVRVGGKVE VGGYMFHLTS
VAPAQGPNYD VLRGHVEVSR NGKPVATLLP ERRLYHSQET PTTEVAIDSG ITRDLYVALG
ESLGQDNWAM RIYIKPFVSW IWSGCVLMVL GGLLAVCDRR YRLRRRSTSS RAAPDTARGG
PSLAMPATEE LR
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