| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2445 |
|---|
| Symbol | |
|---|
| ID | 8020109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2562059 |
|---|
| End bp | 2562529 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644831226 |
|---|
| Product | cytochrome c-type biogenesis protein CcmE |
|---|
| Protein accession | YP_002982389 |
|---|
| Protein GI | 241664029 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.816546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCA GACAACGCCG TCTCGGCATC CTGCTCGCCG CGCTGGTGTG CGCGGGTGCG
GCTACCGCCC TCACGCTGAA TGCGTTCCGC TCCAATCTGG TGTTCTTCTT CAGCCCCAGT
CAGATCGCCG CCAAGGAAGC TCCCGTGGCG CAAGTCTTCC GTCTCGGCGG GCTCGTCGAG
CGCGGGTCCA TCCAACGTGA ACGTGACGGC ATGACGATCC GCTTTATCGT CACCGACACT
GCGCGCGGCG TGCCAGTCGT CTACCACGGC TTGCTGCCGG ACCTGTTCCG CGAAGGCAAG
GGCGTGGTGG CGCGCGGCCG GCTGGGTGAG GACGGCGTCT TCGTCGCCAA CGAGGTGCTC
GCCAAGCACG ACGAAAACTA CATGCCGCCC GAAGCCGCCG ACGCCGTACG CCGCGCTGCG
CAAGTCAACG AACAGATGGC CAAGGAATCT GCCCGGAGCG CGTCACGATG A
|
|---|
| Protein sequence | MTRRQRRLGI LLAALVCAGA ATALTLNAFR SNLVFFFSPS QIAAKEAPVA QVFRLGGLVE
RGSIQRERDG MTIRFIVTDT ARGVPVVYHG LLPDLFREGK GVVARGRLGE DGVFVANEVL
AKHDENYMPP EAADAVRRAA QVNEQMAKES ARSASR
|
|---|
| |