| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2443 |
|---|
| Symbol | |
|---|
| ID | 8020107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2561131 |
|---|
| End bp | 2561916 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644831224 |
|---|
| Product | heme exporter protein CcmC |
|---|
| Protein accession | YP_002982387 |
|---|
| Protein GI | 241664027 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.634324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATC GATCCGGACT CCACACCACG CCCATCGCCG TGCGCCAACC TGCGTCGCGA
CGCTGGAACT GGCTCGCGTA TGCGTCGCCC GTGCGGTTTG ATCCGCTCGC GCGCAAGCTC
GCACCGTGGT TTGGTGCAGC AGCTCTCTTG TTCCTCGTCG CCGGCCTCTA CGTCGGCTTC
GTGGTGGCGC CCACCGATGC GCAGCAGGGC GAGGTCTATC GCATCATCTT CCTGCACGTG
CCGGCCGCGT GGATGTCGAT GTTCGTCTAC CTGGTGATGG CGGGCTATTG CGCGCTGGCG
CTGGTGCTGC GCACGCGGCT TTCGTTGATG ATGGCCTCGG CGCTGGCGCC CACCGGCGCA
CTGTTCACCG CCATTGCGCT GTGGACAGGC GCGCTGTGGG GCAAGCCAAC GTGGGGCACA
TGGTGGGTGT GGGATGCGCG GCTGACGTCG GAGTTGCTGC TGCTGTTTCT GTACCTGGGC
TTCATCGCGC TGGAGAGCGC CATTGAAGAC CCCCGCCGTG CCGAGCGCGC CTGCGCCTTG
CTAGCCGTGG TGGGCGTGGT CAACATCCCC GTGATCTATT TCTCGGTGCA GTGGTGGAAC
ACGCTGCATC AAGGCGCATC CGTCAGCCTG ACGGCGGCTC CGTCGATGGC GATGACGATG
CTGCTCGGCA TGCTGCTGAT GACGCTCGCG TGCTGGATGT ACAGCATCTG CGTGGCGCTG
ATTCGCGTGC GCTGCATCGT GCGCGAGCGC GCCGACGATG ACCACAACCT GAGCACGCCG
GCATGA
|
|---|
| Protein sequence | MTNRSGLHTT PIAVRQPASR RWNWLAYASP VRFDPLARKL APWFGAAALL FLVAGLYVGF
VVAPTDAQQG EVYRIIFLHV PAAWMSMFVY LVMAGYCALA LVLRTRLSLM MASALAPTGA
LFTAIALWTG ALWGKPTWGT WWVWDARLTS ELLLLFLYLG FIALESAIED PRRAERACAL
LAVVGVVNIP VIYFSVQWWN TLHQGASVSL TAAPSMAMTM LLGMLLMTLA CWMYSICVAL
IRVRCIVRER ADDDHNLSTP A
|
|---|
| |