Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2429 |
Symbol | |
ID | 8020093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2549039 |
End bp | 2549686 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644831210 |
Product | SNARE associated Golgi protein |
Protein accession | YP_002982373 |
Protein GI | 241664013 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGG TCGACATCGT GCTGCATGTC GACAAGTCGT TGGGCTTGCT GATTCAGCAA TACGGCGCGT GGGTCTACGT GCTGCTGTTC GCCATCGTGT TCGCCGAAAC CGGCCTCGTG GTGCTGCCTT TTCTGCCGGG CGACACGCTG CTGTTCATTG CCGGGGCCAT GTGCGCCACG GGTCAGATGG ATGCCTGGCT GCTCATCGTA TTGCTGGTGA TTGCCGCCAC AACGGGCAAC ACCGTCAACT ATTTCGTCGG CTCCTGGATC GGCCCCAAGG TATTCGACGG TCACATCCGC TTCCTCGACC ACGAGGCGTT GATGAAAACG CACGGCTTCT ATGAACGTCA CGGCGGCAAG ACGCTGGTGA TGGCGCGCTT CATCCCCGTG GTGCGCACGT TCGCGCCGTT TGTGGCGGGC GTGTCGAAGA TGACGTTCGC GAAGTTCCAG CTCTTCAACA TGATCGGCGC CGTGCTGTGG GTGGCGATCC TGGTGATGTC GGGCGAGGCG TTCGGTAATG TGCCCGTGAT TCGCGATCAC CTGAACACGA TCGTGCTGAT CGGCCTGGGC GCGGCGATCG TGCCGCTCAT GCTGGGCGGG CTGTGGAAGT TGCTCAAACG CCGTCGCGGC GCCGTCGCGC AGAAGTAA
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Protein sequence | MQLVDIVLHV DKSLGLLIQQ YGAWVYVLLF AIVFAETGLV VLPFLPGDTL LFIAGAMCAT GQMDAWLLIV LLVIAATTGN TVNYFVGSWI GPKVFDGHIR FLDHEALMKT HGFYERHGGK TLVMARFIPV VRTFAPFVAG VSKMTFAKFQ LFNMIGAVLW VAILVMSGEA FGNVPVIRDH LNTIVLIGLG AAIVPLMLGG LWKLLKRRRG AVAQK
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