Gene Rpic12D_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2421 
SymbolmurB 
ID8020085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2541222 
End bp2542250 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID644831202 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_002982365 
Protein GI241664005 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGC TCGACACGCA TTATCCCCTA CGCCAGCACA ACACGTTCCG TTTCGAGGCC 
ACTGCCCGCT ACGCCGCACA CGTTCGCGCG CCGGAAGACG TTCCCGCCGC ACTGGCCGAC
CCGCGCGTGC AGGGCCTGCC TGTGTTGGTG CTGGGTGGCG GCAGCAACAT CGTGCTCACG
CGCGATTTCG AAGGCCTGGT GTTGCTGATG GAGAATATGG GCATCGCCAC CGGCCGCAGC
ATGGTCGACG GCCGGGAAGT CCACACCGTC ACCGCAGGCG GCGGCGAATC ATGGCACGGC
CTCGTCGCTC ACACCGTCTC TCATGGCTTG CCTGGGCTGG AAAACCTCGC GCTGATTCCA
GGTACGGCGG GCGCGGCGCC CATCCAGAAC ATCGGCGCAT ACGGCGTCGA GATCAAAGAC
CGCTTCCAGT CCCTGCGCGC CTACGACCGC CACGCCGGCG AGTTCGTCAC CCTCACCGCC
GCCGATTGCG CCTTCGGCTA TCGCGACAGC CTCTTCAAGC GCGCCGGCGC CGATCGCTAC
ATCATCACCG AAGTCACCTT CGCCCTGCCG GTGGATTGGC AGCCCGACAC GCATTACGCC
GAACTCGCGC GCGAGTTGGC CGCGCAGAAC ATCGCCCGCC CGACGGCGCA GGACATCTTC
GATGCGGTGA TCACCATCCG CCGCCGCAAG CTGCCCGATC CGGCTGAAAT CGGCAACGCC
GGCAGTTTCT TCAAGAACCC CATCGTCGAT GCCGCCACGC GCGATGCCCT CGGCGAGCGT
TTCCCGAATC TGGTCGGATA TGTGCAACCC GACGGCACCT ACAAGCTCGC CGCCGGCTGG
TTGATCGATC AGTGCGGCTT CAAGGGCCGG CAGAGCGGCG CAGTGGGCGT GTATGAAAAG
CAGGCGCTGG TGCTGGTGCA CCGTGGCGGC GGCAGCGCGG TTCAGTTGAT GACACTGGCA
CGTGAGATCC AGGACGCCGT GCATGCGCGC TTTGGCGTGC GTATCGAACC CGAACCGGTC
GTGGTGTAA
 
Protein sequence
MALLDTHYPL RQHNTFRFEA TARYAAHVRA PEDVPAALAD PRVQGLPVLV LGGGSNIVLT 
RDFEGLVLLM ENMGIATGRS MVDGREVHTV TAGGGESWHG LVAHTVSHGL PGLENLALIP
GTAGAAPIQN IGAYGVEIKD RFQSLRAYDR HAGEFVTLTA ADCAFGYRDS LFKRAGADRY
IITEVTFALP VDWQPDTHYA ELARELAAQN IARPTAQDIF DAVITIRRRK LPDPAEIGNA
GSFFKNPIVD AATRDALGER FPNLVGYVQP DGTYKLAAGW LIDQCGFKGR QSGAVGVYEK
QALVLVHRGG GSAVQLMTLA REIQDAVHAR FGVRIEPEPV VV