| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2417 |
|---|
| Symbol | |
|---|
| ID | 8020081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2536372 |
|---|
| End bp | 2536995 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644831198 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsY |
|---|
| Protein accession | YP_002982361 |
|---|
| Protein GI | 241664001 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0344] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCAG TCGTCGCAAC CGTCATTTTT GCCCTGGCCG CCTACCTGAT CGGCTCGATC
TCGTTCGCCG TGGTGGTCAG CCGCGCGATG GGTCTGGCAG ACCCGCGTAC CTACGGCTCG
GGCAACCCCG GCGCCACCAA CGTGCTGCGC TCCGGCAATA AGAAGGCGGC CATCCTCACG
CTGCTCGGCG ATGCAGCCAA GGGCTGGCTG GCGGTGTGGC TGGCACAATG GCTGGCGCCG
CGCTTTGGCG TGGACGAGAC CGGCATTGCG CTGGTAGTGA TCGTCGTGTT CCTGGGCCAC
CTGTTTCCGG TGTTCCACCG CTTTGAGGGC GGCAAGGGTG TGGCCACGGC AGCGGGCATC
CTGCTGGCGT TGAACGTGTG GCTGGGGCTG GCCACGCTGG CAACGTGGCT CATCATCGCC
GTGTTCTTCC GTTATTCGTC GTTGGCGGCG CTGGTGTCGG CGGTGTTCGC GCCGTTCTTC
TATGTGCTGA TGAACGGCTT CGACTGGATT GCCGGCGCGG TTGCGCTGAT GGCAGTGCTC
CTCATCGCGC GCCACCGCGC CAATATCGCC AAGCTGCTCG CCGGCAAGGA AAGCCGCATC
GGCGAGAAAA AGAAAACAGC TTAA
|
|---|
| Protein sequence | MSPVVATVIF ALAAYLIGSI SFAVVVSRAM GLADPRTYGS GNPGATNVLR SGNKKAAILT
LLGDAAKGWL AVWLAQWLAP RFGVDETGIA LVVIVVFLGH LFPVFHRFEG GKGVATAAGI
LLALNVWLGL ATLATWLIIA VFFRYSSLAA LVSAVFAPFF YVLMNGFDWI AGAVALMAVL
LIARHRANIA KLLAGKESRI GEKKKTA
|
|---|
| |