| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2415 |
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| Symbol | xerD |
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| ID | 8020079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2534891 |
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| End bp | 2535787 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831196 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_002982359 |
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| Protein GI | 241663999 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGC GGAGCGCAGA CGCCATCCAG CGCTTCTGCG ACGCACTGTG GCTGGAGGAC
GGCCTCGCCC GCAATACGCT GGATGCGTAC CGGCGCGACT TGACGCTCTA CGCGCACTGG
CTGGCCGCGC GCGGCAAGTC CATCGCCGAA ACCGAAGACG GCGACCTGGC CGATTACTTC
GCCGCACGCC ATGCCGAGAG CCGTGCATCG TCGGCCAACC GGCGCCGCAC CGTCTTCAAG
CGCTTCTTCC AGTGGGCGCT GCGGGAGCAC GTGGTGAGCA CCGATCCGTC GCGCCTGCTG
CCGACGGCCA AGCAGCCGCC CCGCTTTCCG AAGACGCTGT CCGAAACCCA AGTCGAGGCG
CTCATCAACG CGCCGGATGT CGACACGCCG CTCGGCCTGC GCGACCGCGC GATGATCGAG
CTGATGTATG CGAGCGGGCT GCGCGTGTCG GAAATCGTCG CGCTGAAAAC GGTGGAAGTG
GGCCTGAACG AAGGCGTGGT GCGTGTGGTC GGCGGCAAGG GCGGCAAGGA CCGCCTGGTA
CCGTTCGGCG CCGAAGCGGG CGACTGGCTG CGGCGTTATT TACGCGATGG CCGCACGGCG
CTGCTGGGTG AACGTACGGC TGACGCGCTG TTCGTGACGG CACGTGGCGA AGGCATGACG
CGCCAGGCGT TCTGGTACCT CATCAAACGC TATGCGCTGC TCGCCGATAT CCACGCCCCG
TTGTCTCCGC ATACGTTGCG GCACGCGTTT GCCACGCACC TGCTAAACCA CGGCGCAGAC
TTGCGCGTCG TGCAGATGCT GCTCGGCCAC GCGGATATTT CCACCACGCA GATCTACACC
CACGTCGCAC GCGAGCGGCT GCGCACACTC CATGCGCAGC ACCATCCACG CGGATAG
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| Protein sequence | MPPRSADAIQ RFCDALWLED GLARNTLDAY RRDLTLYAHW LAARGKSIAE TEDGDLADYF
AARHAESRAS SANRRRTVFK RFFQWALREH VVSTDPSRLL PTAKQPPRFP KTLSETQVEA
LINAPDVDTP LGLRDRAMIE LMYASGLRVS EIVALKTVEV GLNEGVVRVV GGKGGKDRLV
PFGAEAGDWL RRYLRDGRTA LLGERTADAL FVTARGEGMT RQAFWYLIKR YALLADIHAP
LSPHTLRHAF ATHLLNHGAD LRVVQMLLGH ADISTTQIYT HVARERLRTL HAQHHPRG
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