Gene Rpic12D_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2413 
Symbol 
ID8020077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2533340 
End bp2534317 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content63% 
IMG OID644831194 
Producthypothetical protein 
Protein accessionYP_002982357 
Protein GI241663997 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.325014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGG GACGACTGAT CGCCAACCTG ATCGGCGCCG CAGGCATGGC GTTGTGCGGC 
CCGGCACTGG CCGACAACTA CCCCGCCAAG CCGCTCAAGC TGATCATTCC ATTTCCGCCG
GGCGGCACGA CCGACATCGT CGGGCGCAGC GTGGCCGATC AGCTATCGAA GGTGCTGGGC
CAAGCCGTGG TCGTGGAAAA CAAGGGCGGC GGCGGCGGGT CGATCGGCGC CGATGCCATC
GCCAAGGCCG CGCCGGATGG CTACACGATT GGCATCGCCA CCGTCTCCAC GCATGCGGTC
AACCCGGCGT GCAACCCGAA GCTTTCGTAC GACCCGCTGA AGGATTTCAA GCCGATCACC
AATCTGGCCA CGGTGGCCAA CGTGATTGCG GTCAACCCGA CCTTTCCGGC CAAGAACTAC
AAGGAATTTG TCGCGGCGCT GACGGCCAAC CCCGGCAAAT ATTCGTTCGC GACATCCGGC
ACCTGCGGCA TCGGCCACAT GCTGGGGGAA GCGTTCAAGG TGCTAACCAA AACGCAGATG
GTCCATGTGC CGTATCGCGG TGCGGGCCCG GCGCTGAACG ACGTGCTGGC CAACCAGGTG
CCGATCATGG TCGACAACCT GCCCTCGTCC ATGCAGTTCA TCAAGAGCGG CAAGCTGCGG
CCGATCGTGG TGGCGTGGAA CAAGCGCATC GATAGCCTGC CCGACGTGCC GACCTTTGCC
GAAGTCGGCC TGAAAGATGC AAACGACCCT GCGTGGTACG GACTCGTCGC GCCGGCCGGC
ACGCCGGACG AGGTTATTCG CAAGCTCAAC GAAGCTTCGG TCAAGGCGCT GAAAGAACCG
GGCCTGGTCG ATAGATTTCG CGGCGCCGGT GCCGAGCCTG TGGGCAACAC GCCGCAGCAA
TACACGGCCG AAATCAAGCG CGAATTCGAA AAGATGCGCA CCCTCGTCAA GCAGCAGAAC
ATCAAGCTGG AGCAGTAA
 
Protein sequence
MPKGRLIANL IGAAGMALCG PALADNYPAK PLKLIIPFPP GGTTDIVGRS VADQLSKVLG 
QAVVVENKGG GGGSIGADAI AKAAPDGYTI GIATVSTHAV NPACNPKLSY DPLKDFKPIT
NLATVANVIA VNPTFPAKNY KEFVAALTAN PGKYSFATSG TCGIGHMLGE AFKVLTKTQM
VHVPYRGAGP ALNDVLANQV PIMVDNLPSS MQFIKSGKLR PIVVAWNKRI DSLPDVPTFA
EVGLKDANDP AWYGLVAPAG TPDEVIRKLN EASVKALKEP GLVDRFRGAG AEPVGNTPQQ
YTAEIKREFE KMRTLVKQQN IKLEQ