Gene Rpic12D_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2412 
Symbol 
ID8020076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2532567 
End bp2533217 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID644831193 
Productputative lipoprotein transmembrane 
Protein accessionYP_002982356 
Protein GI241663996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.49013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCG CTCTTGTTGA TCTCCGTTGC GCATTGCAGG CTGCAATCCG TGTCCGCTCA 
TCCTGGATTG CACGCGCGTG GCGCGACGGC ATCCTTGGCG CATTGCTCTG CGCCGCGTGT
GTGAGCCCGG CATGGTCCAC GGTGAACGTC GAGGGGGTGC CCTTCGACGA CGCCGCGCGC
GTGGCCGGCC GCGAACTGCT GCTCAACGGC ACGGGCCTGC GTTCGGTGTT CGTTATCAAG
GGCTATGTCG CGGGTCTGTA TCTGCCCGAG CGCGCAAAGA ACGCGGCCGT CGTCCTCGGC
ATGAAAGGCC CGAAGCGGTT GCAGATTCAT CCGTTGCGCA ATGTGGGCGC CGACACGTTC
ATCCACGCAT TGAACGACGG CATCCATCGC AACCAGACCG AAATCCAAAT GCAGAAGCTC
GCCGACCGGC TAACGCAGCT GGAAGACGCG ATGCGCCAGA TCGGCTCCAC CAAGCGCGGC
GACACCATCA ACTTCGACTA TGCCCCCGAT GCTGGCACCA CCATCAGCAT CAATGGCGTG
GCGCGCACCA AGGCCATCCC CGGCGAAGAT TTCTACCAGG CCGTGCTCAG CATCTTCATC
GGCAACAGCC CGGTGGACCG CGAGCTGAAA AACGGCTTGC TCGGAAGCTG A
 
Protein sequence
MFSALVDLRC ALQAAIRVRS SWIARAWRDG ILGALLCAAC VSPAWSTVNV EGVPFDDAAR 
VAGRELLLNG TGLRSVFVIK GYVAGLYLPE RAKNAAVVLG MKGPKRLQIH PLRNVGADTF
IHALNDGIHR NQTEIQMQKL ADRLTQLEDA MRQIGSTKRG DTINFDYAPD AGTTISINGV
ARTKAIPGED FYQAVLSIFI GNSPVDRELK NGLLGS