| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2405 |
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| Symbol | |
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| ID | 8020069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2525674 |
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| End bp | 2526432 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644831186 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002982349 |
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| Protein GI | 241663989 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.29016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATTC GCGATCAGGT ATTCATCGTC ACCGGCGGTG CGTCGGGACT GGGCGCCGGC
ACAGCACGCA CGTTAGCGGA AGCCGGCGGC AAGGTGGTGA TTGCCGACCT GAACGAGGCC
GCCGGCTCCG CGCTGGCGCA GGAACTGGGC GGTCGCTTCG TGCGCTGCGA CGTCACGTCC
GAGGCGGACG GGCAAGCCGT TGTGGAAGCC GCCACATCGC TGGGCACGCT GCGCGGGCTG
GTGAACTGCG CCGGGATTGC CACAGCGTCG CGCACGGTGG GCAAGACGGG GCCGCACCCC
TTGGACCAGT TCGCACGCGT GATCAACATC AACCTGATCG GCACGTTCAA CATGATCCGG
TTGGCCGCGA CGGCCATGGC CAGCAATGCG CCTGATGCCG GCGGCGAGCG CGGCGTGATC
ATCAACACCG CATCGGTGGC GGCATTTGAC GGGCAGATTG GCCAGGCCGC CTACGCGGCA
TCCAAGGGCG GCGTGGTGGC GATGACGCTG GCGATTGCAC GTGACCTGTC GCGTGACGGC
ATCCGCGTGA TGACGATTGC GCCGGGCATT TTCGAAACGC CGATGCTGCT CGGCATGCCG
GCCGAAGTGC AGGACGCGCT GGGCAAGATG GTGCCGTTCC CGCCGCGCCT GGGTAAGCCG
TCGGAATATG CGCAGCTCGC GCGTGCGATC GTTGAGAACC CGATGCTCAA TGGTGAGACC
ATCCGCCTGG ATGGCGCCAT CCGCATGCAG CCGAAATAA
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| Protein sequence | MEIRDQVFIV TGGASGLGAG TARTLAEAGG KVVIADLNEA AGSALAQELG GRFVRCDVTS
EADGQAVVEA ATSLGTLRGL VNCAGIATAS RTVGKTGPHP LDQFARVINI NLIGTFNMIR
LAATAMASNA PDAGGERGVI INTASVAAFD GQIGQAAYAA SKGGVVAMTL AIARDLSRDG
IRVMTIAPGI FETPMLLGMP AEVQDALGKM VPFPPRLGKP SEYAQLARAI VENPMLNGET
IRLDGAIRMQ PK
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