Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2399 |
Symbol | |
ID | 8020063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2521272 |
End bp | 2521892 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831180 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_002982343 |
Protein GI | 241663983 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0433367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTTCCA TCATTCAAGC CGCCGGCTGG CCGATCTGGC CGCTGTTGAT CGCCTCGGTG CTCGCACTCG CGCTCATCAT CGAACGCTTC GTCGCCCTGC AACGCAAGAA GATCATTCCG CCCAAGGTCT ATGACGAGGC GCTCGCCGTC GCGCATCAGC GCCGCGCCAC ACCGGAAGTG GTGAACACGC TGGAGCAGGG ATCGCCGCTG GGCCGCCTGC TGGCGGCTGC GCTGCGTCAC GTGGTGCTGC ATCCGAACAC CTCGCGCGAT GCCGCCAAGG AAGTGGTGGA AGAAGCCGGC CAGAACGTTG CCCACCGGCT CGAACGCTAT CTCAACGCAC TCGGCACGAT TGCCTCGGTG GCGCCGCTGA TGGGCCTGTT CGGCACGGTC GTCGGCATGA TCGAGATCTT CGGCAGCCAG ACCGCCGCCG GCACGAACCC GCAAGCGCTG GCGCACGGCA TCTCGGTCGC GCTGTACAAC ACGGCGCTGG GCCTGGTGGT GGCCATCCCG ACGCTGATCT TCTGGCGCTA CTTCCGTGGC GTGGTCGATA ACTACGTGGT CGAGCTGGAG CATCTCTCCA CCACGTTCCT CGACGCGATC CTGCCGCCGC GGCGCGGTTG A
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Protein sequence | MFSIIQAAGW PIWPLLIASV LALALIIERF VALQRKKIIP PKVYDEALAV AHQRRATPEV VNTLEQGSPL GRLLAAALRH VVLHPNTSRD AAKEVVEEAG QNVAHRLERY LNALGTIASV APLMGLFGTV VGMIEIFGSQ TAAGTNPQAL AHGISVALYN TALGLVVAIP TLIFWRYFRG VVDNYVVELE HLSTTFLDAI LPPRRG
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