Gene Rpic12D_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2399 
Symbol 
ID8020063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2521272 
End bp2521892 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID644831180 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002982343 
Protein GI241663983 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0433367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTCCA TCATTCAAGC CGCCGGCTGG CCGATCTGGC CGCTGTTGAT CGCCTCGGTG 
CTCGCACTCG CGCTCATCAT CGAACGCTTC GTCGCCCTGC AACGCAAGAA GATCATTCCG
CCCAAGGTCT ATGACGAGGC GCTCGCCGTC GCGCATCAGC GCCGCGCCAC ACCGGAAGTG
GTGAACACGC TGGAGCAGGG ATCGCCGCTG GGCCGCCTGC TGGCGGCTGC GCTGCGTCAC
GTGGTGCTGC ATCCGAACAC CTCGCGCGAT GCCGCCAAGG AAGTGGTGGA AGAAGCCGGC
CAGAACGTTG CCCACCGGCT CGAACGCTAT CTCAACGCAC TCGGCACGAT TGCCTCGGTG
GCGCCGCTGA TGGGCCTGTT CGGCACGGTC GTCGGCATGA TCGAGATCTT CGGCAGCCAG
ACCGCCGCCG GCACGAACCC GCAAGCGCTG GCGCACGGCA TCTCGGTCGC GCTGTACAAC
ACGGCGCTGG GCCTGGTGGT GGCCATCCCG ACGCTGATCT TCTGGCGCTA CTTCCGTGGC
GTGGTCGATA ACTACGTGGT CGAGCTGGAG CATCTCTCCA CCACGTTCCT CGACGCGATC
CTGCCGCCGC GGCGCGGTTG A
 
Protein sequence
MFSIIQAAGW PIWPLLIASV LALALIIERF VALQRKKIIP PKVYDEALAV AHQRRATPEV 
VNTLEQGSPL GRLLAAALRH VVLHPNTSRD AAKEVVEEAG QNVAHRLERY LNALGTIASV
APLMGLFGTV VGMIEIFGSQ TAAGTNPQAL AHGISVALYN TALGLVVAIP TLIFWRYFRG
VVDNYVVELE HLSTTFLDAI LPPRRG