| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2396 |
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| Symbol | |
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| ID | 8020060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2517302 |
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| End bp | 2518021 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644831177 |
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| Product | peptidase M50 |
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| Protein accession | YP_002982340 |
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| Protein GI | 241663980 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.311276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGC TGCTGATCCT GCTGTTTTCC GGGCTGAAGT TCGGCAAGCT GCTGACCACC
GGCGGCACGA TGCTGCTGTC GGTGGCCGCC TATGCCTTCG TGTTCGGCTG GCGCTATGCG
GTGGGTTTCG TGGTGCTGCT GTTCATCCAC GAGATGGGCC ACTTCATGGC GGCACGCCAG
CGCGGGCTGA CCGTGGGAGC GCCCACCTTC ATCCCCTTCG TTGGCGCGTG GATCGATTTG
AAAGAGCAGC CGATGGATGT GGAAACCGAG GCCCATATCG GCCTGGCCGG GCCCGTCGCC
GGCACGGTGG GCGCGATGCT CTGCTATGGG CTCGCACGCT ACACCGACAG CCAGTTGCTG
CTGGCCCTGG CCTACGCCGG CTGCTTCCTG AACCTGTTCA ACCTGATCCC GCTCTCGCCG
TTTGACGGTG GACGCATTAC GGCGGTGCTG TCGCCGCGCA TCTGGTTTTT GGGCGTGCCG
GTGCTGGTGG CGCTGTTCGT CTGGCGGCCG AGTCCGATCC TGATCCTGAT TGCGGTGTTG
GCCGTGCCGC AGTTGATGAA GGCGTGGCGC TACGACCCAC ATGCGCCGGA AAACCGCGCG
TACTACAGCA TCTCGAACGA ATCTCGCCTG ACTTACACCG TGTATTACAT CGGCCTGGTC
GTCTTTCTGG CGATGATGAG CCACGAGCTG CACGACATGC TGGGCAGCGT GCGGGCATAA
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| Protein sequence | MAKLLILLFS GLKFGKLLTT GGTMLLSVAA YAFVFGWRYA VGFVVLLFIH EMGHFMAARQ
RGLTVGAPTF IPFVGAWIDL KEQPMDVETE AHIGLAGPVA GTVGAMLCYG LARYTDSQLL
LALAYAGCFL NLFNLIPLSP FDGGRITAVL SPRIWFLGVP VLVALFVWRP SPILILIAVL
AVPQLMKAWR YDPHAPENRA YYSISNESRL TYTVYYIGLV VFLAMMSHEL HDMLGSVRA
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