Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2391 |
Symbol | |
ID | 8020055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2513207 |
End bp | 2513971 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644831173 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_002982336 |
Protein GI | 241663976 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAATC GTCGTCATTT CATGCATTCG ATGCTGGCTT GTGCCGTGGC GTTGTCCGCT GCGGCGTCTT TCGCAACCGC TGCGCACGCT GCTGGAGAGC CGCTGCGCGT CGCCACCGAT GCCACGTTCG CGCCGATGGA GTTTGTCGAA AACGGCAAGC GTACCGGCTT TGATGTGGAC CTGATCGAGG CACTGGCCCG CACCATGGGC CGCCCGGTCG AATGGACGGA CATCGATTTC AAGGGCCTCG TGCCGGGCCT GATCTCGCGC CGCTTTGACG TGGCCATCTC GGGCATCTAC ATCACGGAAG AGCGCAAGAA GGTGGTGGAC TTTACGGTGC CGTACTACCA CGGCGGCCTG GTCGCGATGG TCAAGCAAGG CAATACGGCC ATCAAGACCC CGGCAGATCT GAACGGCAAG AAGGTCAGCG TGCAGGTCGG AACCAAGTCG GTCAACTACC TGAAGGAAAA CTATCCGAAG GTCGAGCGCG TGGAAGTCGA AAAGAACGAG CAGATGTTCA ACCTCGTCGA AATCGGCCGC GCCGATGCCG CCGTCACAGG CCGCCCCGCC GCCGCGTACT ACGTCAAGGC GCGTCCGGGC CTGCGCCTGG TTGAGCCCGC GCTGACTAGC GAGGAATACG GCATCGCCGT GCGTCGCGAT CAGCCCGAGC TGACCAAGGC GTTGAACGCG GCATTGGACA AGATCAAGGC CGACGGCACG TACGACCAGA TCGTCAAGAA GTGGTTTGGC ACCACCGCGA AGTAA
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Protein sequence | MGNRRHFMHS MLACAVALSA AASFATAAHA AGEPLRVATD ATFAPMEFVE NGKRTGFDVD LIEALARTMG RPVEWTDIDF KGLVPGLISR RFDVAISGIY ITEERKKVVD FTVPYYHGGL VAMVKQGNTA IKTPADLNGK KVSVQVGTKS VNYLKENYPK VERVEVEKNE QMFNLVEIGR ADAAVTGRPA AAYYVKARPG LRLVEPALTS EEYGIAVRRD QPELTKALNA ALDKIKADGT YDQIVKKWFG TTAK
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