Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2380 |
Symbol | |
ID | 8020044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2503836 |
End bp | 2504603 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831162 |
Product | protein of unknown function DUF81 |
Protein accession | YP_002982325 |
Protein GI | 241663965 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.747266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGC TTCCGTTTTC AACCGCCCTG CTCGTCGCGG CGGCCGGCGT TTATGCCGGC GCCCAGAATG CCCTCGCGGG CGGCGGATCG TTCATCACGT TCCCCGCATT GCTGCTGGCC GGGCTCAACC CGCTAGGCGC CAACATGACC TCGACGATCG CGCTGTTCCC CAGCCAGATC ACCTCGTCGA TCGCGGGGCG AAAACTGGCC GGCGGCGTCG ATGCCGGCGA GCATCACCTG TCGCTGCGGC AGCTCATTGT CATCAGTCTG GTGGGCGGCG TGCTCGGCGC GTTGTTGCTG CTGGCAACGC CACCGTCGTT CTTCGCCAAG CTCGTGCCGT ATCTCGTGCT GTTTGCAACC AGCGTGTTTG CGTGGGGCAG CTTCCGCCGC AAACCGCTGC ATGCGGCATC GGGCATGTCG ACCACCGCGC TCGCAACCGC CCAATTTGCG ATTGCCATTT ACGGCGGCTA CTTCGGCGGC GGAATCGGCT TCCTGATGCT CGCCGCACTC ACGGTGGCCG GCCAGCAGGT GCGCATGGCG GGCGCGACCA AGAACGTGCT CGCCATGACG ATGAATGCAT CGGCCGTGGC GGTGTTTGCA TTCTCCCCGC AGGTCAACTG GGCGGCCGTG GTGGCGCTGG GTATCGGGGG CATCGCAGGC GGATTCGCCG GTGCGTGGCT GCTGCACCGG CTGCCGGAAA AAGTGCTGCG CGGCTTCGTG GTTATCGTCG GGGTCATCCT GACGATCTGG CTGTTCATGC GCGCTTGA
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Protein sequence | MTTLPFSTAL LVAAAGVYAG AQNALAGGGS FITFPALLLA GLNPLGANMT STIALFPSQI TSSIAGRKLA GGVDAGEHHL SLRQLIVISL VGGVLGALLL LATPPSFFAK LVPYLVLFAT SVFAWGSFRR KPLHAASGMS TTALATAQFA IAIYGGYFGG GIGFLMLAAL TVAGQQVRMA GATKNVLAMT MNASAVAVFA FSPQVNWAAV VALGIGGIAG GFAGAWLLHR LPEKVLRGFV VIVGVILTIW LFMRA
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