Gene Rpic12D_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2380 
Symbol 
ID8020044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2503836 
End bp2504603 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID644831162 
Productprotein of unknown function DUF81 
Protein accessionYP_002982325 
Protein GI241663965 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.747266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGC TTCCGTTTTC AACCGCCCTG CTCGTCGCGG CGGCCGGCGT TTATGCCGGC 
GCCCAGAATG CCCTCGCGGG CGGCGGATCG TTCATCACGT TCCCCGCATT GCTGCTGGCC
GGGCTCAACC CGCTAGGCGC CAACATGACC TCGACGATCG CGCTGTTCCC CAGCCAGATC
ACCTCGTCGA TCGCGGGGCG AAAACTGGCC GGCGGCGTCG ATGCCGGCGA GCATCACCTG
TCGCTGCGGC AGCTCATTGT CATCAGTCTG GTGGGCGGCG TGCTCGGCGC GTTGTTGCTG
CTGGCAACGC CACCGTCGTT CTTCGCCAAG CTCGTGCCGT ATCTCGTGCT GTTTGCAACC
AGCGTGTTTG CGTGGGGCAG CTTCCGCCGC AAACCGCTGC ATGCGGCATC GGGCATGTCG
ACCACCGCGC TCGCAACCGC CCAATTTGCG ATTGCCATTT ACGGCGGCTA CTTCGGCGGC
GGAATCGGCT TCCTGATGCT CGCCGCACTC ACGGTGGCCG GCCAGCAGGT GCGCATGGCG
GGCGCGACCA AGAACGTGCT CGCCATGACG ATGAATGCAT CGGCCGTGGC GGTGTTTGCA
TTCTCCCCGC AGGTCAACTG GGCGGCCGTG GTGGCGCTGG GTATCGGGGG CATCGCAGGC
GGATTCGCCG GTGCGTGGCT GCTGCACCGG CTGCCGGAAA AAGTGCTGCG CGGCTTCGTG
GTTATCGTCG GGGTCATCCT GACGATCTGG CTGTTCATGC GCGCTTGA
 
Protein sequence
MTTLPFSTAL LVAAAGVYAG AQNALAGGGS FITFPALLLA GLNPLGANMT STIALFPSQI 
TSSIAGRKLA GGVDAGEHHL SLRQLIVISL VGGVLGALLL LATPPSFFAK LVPYLVLFAT
SVFAWGSFRR KPLHAASGMS TTALATAQFA IAIYGGYFGG GIGFLMLAAL TVAGQQVRMA
GATKNVLAMT MNASAVAVFA FSPQVNWAAV VALGIGGIAG GFAGAWLLHR LPEKVLRGFV
VIVGVILTIW LFMRA